LOCUS BAK65606.1 531 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 isocitrate lyase protein.
ACCESSION AP012222-931
PROTEIN_ID BAK65606.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_09310"
/transl_table=11
BEGIN
1 MTYHAEIERL TDSIALQGPG WAAIDPESAA RMRAQNRFRT GLDIARYTAG IMRRDMAAYD
61 LDPGNYTQSL GCWHGFIGQQ KLIAIKKHFG STRGRYLYLS GWMIAALRSE FGPLPDQSMH
121 EKTSVPALIA ELYTFLRQAD ARELGGLFRA LDDAKRTHNQ LDEMRLINAI ETHETHVVPI
181 IADIDAGFGN AEATYLLAKK MIEAGACALQ IENQVSDEKQ CGHQDGKVTV PHEDFLQKIR
241 AIRYAFLELG VEDGIIVART DSLGAGLTKQ IAYSREPGDL GDQYNGFLDC EDIDPADVGN
301 GEVFISRAGK LLRPKRLPSN LYQFRPGTGE DRCVLDSITA LRNGADLLWI ETEKPHIGQI
361 AGMMDRIRAV IPNAKLVYNN SPSFNWTLNF RQQVFDAWEA EGRDVSAYDR AKLMSADYDG
421 TALASEADER IRTFQRDASA RAGIFHHLIT LPTYHTAALS TDNLARDYFG EQGMLGYVAG
481 VQRREIREGI ACVKHQAMAG SDIGDDHKDY FAGDAALKAG GGANTMNQFA A
//