LOCUS BAK65586.1 440 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 L-sorbosone dehydrogenase protein.
ACCESSION AP012222-911
PROTEIN_ID BAK65586.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_09110"
/transl_table=11
BEGIN
1 MRALRRQSVS RPAVAGLALS LALAGCSDGP LPPEQIGSRP HLPEPAETLV PPMKIASPTG
61 WDGGKPRAPA GFTVTALATD LKVPRQMLVL PNGDLLVAEG LGGGAPVMRP KDLIAGIIKS
121 RGKSGTEGGD RITLLRDEDG DGRADFRTTF ISGLNAPYGL ALVDGSLYVA NQDALLRFPY
181 QEGQTRITTP GTEVTKLPSR LNHHWTKALV ASADGTKLYV GIGSNSNVGE RGMAVEEERA
241 VIWEIDRETG ARRTYVTGIR NPTALAIEPR TRALWAVVNE RDEIGANLVP DYLTAVRPGA
301 FYGWPYSYWG RHIDPRVRPQ KPELVASAVT PDYSLGSHVA PLGLAFVRGP GFAGSYGEGA
361 FVGQHGSWNR RTLVGYNVVW VPFSNGRPAG PPRPFLTGFI DEDGNARGRP VGVTYDPARR
421 ALFVADDLSN TIWRVAPATR
//