LOCUS BAK65579.1 842 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative cytochrome c oxidase subunit
I protein.
ACCESSION AP012222-904
PROTEIN_ID BAK65579.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_09040"
/transl_table=11
BEGIN
1 MTSETGFDPA LYARFPTREP RPPEEEETLR RIWCKPRGLE YLTVVNNNYV GVYYVGIAFL
61 FFLLAGILGL LMRVQLAAPL LDVLPQETYN QVFTMHGTVM MFLFAVPAVE AAAVLLLPQM
121 LAARDLPFPR LSAYAFWAYA VGGLCFFASL FVGLAPDGGW FMYPPLTSKA FSPGINTDFW
181 LLGIGFIEIS AIAGAIEIIV GVLRTRAPGM TLDKMPIFAW AMLVFAVMII IAFPSVILAT
241 LLLEIERAFN WPFFESARGG DPLLWQHLFW FFGHPEVYII FLPAAGMMSM IVPVVARTEL
301 VGYRLIVLAM LGTGFISFGV WAHHMFTTGM PPMTTGFFSA ASMAVSVPAG IQVFSWIATL
361 ATGRPRYNGP GLFVLGSIII FVTGGLTGVM VALVPFDWQV HDTYFIVAHF HYVLIGGMVF
421 PLFAAFYHWV PMISRRALSE RLARWVFGLM FLGMNIAFMP MHLTGFMGMP RRVYTYLPEH
481 GWDLPNLIST IGAFMFAAGV LLFVIDLLRN FRLAPGGGNA GNVHGAGTLE WLPTKLYSAR
541 SIPIVDSRQP LWRDPALADD VAQGRYFLPG SATGLRETMV TSPLRAEPQY LQIMPTPSAW
601 PLAAAVFTAG FFLSLTVQAY AFGFASAILA VIAILRWLWD TDRRLPMERV DIGAGIQVPT
661 YVTGPSSLGW WATVTLLVVL GMMFAMALFG LAYLRSNQPD FWSAPPSLLA ALPTLALHGL
721 ALALAVATRR LLRIGAGWAS GALVGAVACG ALALALDNGQ WMATGLHPQM SGQAAIVYAI
781 QLLQGCTFAV GGLMAGYCVA RVLRGLVSVP ANTTVDVCAL FIAFAAAEGL VGSVFSRLIG
841 AG
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