LOCUS BAK65562.1 468 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative porin protein.
ACCESSION AP012222-887
PROTEIN_ID BAK65562.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_08870"
/transl_table=11
BEGIN
1 MAVILAAGLL SAPSTPAMAQ DEAAVAAMRD EIARLRAQVA ALEERLDLMA AEGSKTGSTP
61 PSAPLSSSLA ASQPAPAHVA SAAGNAQAPA QAQALAVPAA SPPAPTPASG FTLKQRGRLQ
121 FDGNIVSRPA GMTEPTLGWS ADVRRAFLGV EGSLGGGLGY RFEMDFASGD PLFTDLWLTY
181 KKGSWTVTLG HDRMTTLEDL TSDLQTSFLE RSGFIQAFGF ERRLGLSAAY KDSDVVLSAG
241 IYSDDLETLG SGVADNSYAV DTRWVYMPKL GKVQLHLGGS LHHRELNDLA DSLRYRARPG
301 ARTTSVRFVD TGSFSASAET GYGLEFAALR GPFHVAAESY WQNVDRPNLA DPTFFGIYGE
361 IGYVFAGGEA RGYRAGSFSS IKPTKGIDKG GAGAWQVNLR YDWLDLNDAG VRGGEQAIAG
421 LSLIWVPLEH VKFMANYLHV DVRDTPILSD GRDDYDADVF GLRAQYDF
//