LOCUS BAK65534.1 717 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 1,4-alpha-glucan branching enzyme protein.
ACCESSION AP012222-859
PROTEIN_ID BAK65534.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="2.4.1.18"
/gene="glgB"
/locus_tag="SLG_08590"
/note="protein synonym:glycogen branching enzyme"
/transl_table=11
BEGIN
1 MKPPKAAIEA LLAGTHADPF SLLGVHEGPG GAHARVIVPG AESVEAHDLG GNPLGALGCA
61 DQRGLFEGPI AGGRQPIRYR ARAGAAEWWL SDPYSFGPVL GPVDDLLMAE GTHFRLFDKL
121 GAHLISHEGA EGVHFAVWAP NAQRVALVGD FNDWDGRRHV MRRRADIGVW EIFIPDIGAW
181 HAYKYLIIGP DGTAQPLKAD PYAFASELRP KTASLTYETG THEWGDAAHR AHWASVDPRR
241 TPISIYEVHP GSWQRDESGW FLPWDELAAR LIPYVVEMGF THIEFLPISE HPYDPSWGYQ
301 TTGLYAPTAR FGDPDGFARF VDGAHRAGVG VLLDWVPAHF PTDAHGLGRF DGTALYEHED
361 PRLGFHPDWN TAIYNFGRRE VSSFLVNNAL FWAERYHVDG LRVDAVASML YRDYSRPADQ
421 WIPNQEGGRE NWEAVAFLQA MNKAVYGAHS GIVTIAEEST AWPGVTHPVH DNGLGFGFKW
481 NMGFMHDTLS YLARDPAHRR YHHDEITFGL MYAYSENYVL PLSHDEVVHG KGSLLTKMAG
541 DDWQKFANLR AFYALMWGYP GKKLLFMGQE FAQRREWSEG RSLDWDLLDA PAHEGVRTLV
601 RDLNHLYRDL PALHERDCEA DGFEWLIADD RDNSVFAWLR KAPGAPPVAI IANLTPRVLD
661 HYEVPLPLDG VWREMLNSDA TIYGGKGVGN MGKVTAEHGR AVMTLPPLGT IMLLGEG
//