LOCUS BAK65433.1 446 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative dioxygenase protein.
ACCESSION AP012222-758
PROTEIN_ID BAK65433.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_07580"
/transl_table=11
BEGIN
1 MRADENRTLT QTGPETPMGR LMRQYWIPAF LPEETPAGGA PLRLRLLGEN FLAFRSPDGS
61 LGVVDHRCAH RCASLFYGRN EEGGIRCVYH GWKFDRTGQC IEMPSEPPET DYKHLVKIRA
121 LPVVERYGVA WVYMGDRDVP PPLPHFDLDE LGADEPISVS FMMRECNWLQ ALEGDIDTCH
181 VGFLHLGGAS PDQFEEGSIN YYRQLPENLA PRYEAIETDY GAVYCAYRHA GPDNLYHRIG
241 HFALPFWTMS PSEPMDHIRV RAWVPIDDHH AMLVVIGGPR TGGTTLTREG KPLPGTTSPI
301 KFLPNSSDWL GRWRIEANLR NDHLISREVQ STQSYSGIEA IPVQDQAVTE SMGPIVDRTM
361 EHLGTSDRMI VLTRRKLLRT AAALSNEGIV PDGVDEAGIY HDMRSGFAVL PADEDWLAYY
421 NARRAAWSGG KAKPIARRPK SLPVSA
//