LOCUS BAK65426.1 476 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 efflux pump outer membrane protein protein.
ACCESSION AP012222-751
PROTEIN_ID BAK65426.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_07510"
/transl_table=11
BEGIN
1 MRKLSLIALL LTGACSMNPK LEVPAAPVAQ TYPDAQAAEA ASAAGIDWPS MFGDPRLQRI
61 IALALENNRD LRIAALNVEA ARSQFRVARG AQLPQVDATG SYTRQRVPTA AATAGIGGVP
121 GNGDTPSGFE FEQYTASAAL TSFEIDLFGR LRSQSQAAFE RYLASDEGRR AARIALIGSV
181 VDAYLEERLA QEQLALTERT LADWTASLDI TQKRHAARQA SGMDLAQAEG QVRQAEADQA
241 MRTRALSQAR NALQLLVGGP LPDDLPAPMS LMDQPVRTQL PAGLPSDLLR NRPDIRQAEH
301 TLIAANADVG AARAAFFPRL SLTAMFGFTS LAFDGLFDND NRNWSFSPQV TQPIFRGGSL
361 RGELRLAEVR KSIAVAEYER AIQAAFREVA DGLAGRATFA TQSEAQRKAT QAAARRVELS
421 TLRYRAGLDS RLELLDAQRS DYAAQQALLD LRRQELSSAA GLYRALGGGD EEPEGN
//