LOCUS BAK65425.1 1043 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 efflux pump inner membrane protein protein.
ACCESSION AP012222-750
PROTEIN_ID BAK65425.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_07500"
/transl_table=11
BEGIN
1 MPRFFIDRPV FAWVIAIVIV LIGVISIPQL PIERYPSIAP PSIQITATYP GATPQTMNDS
61 VVSLIERELS SVKKLLYFES SVDTSGQATI TATFQPGTDP ELAQVDVQNR LKTAEPRLPQ
121 VVRQLGIVVE AANPNFLQLV NIESKNGDLD ATALTDYAAR YVVEDLKRVN GVGRVQLFGS
181 ERAMRIWVDP ARLAAVNLAM NDVTQAIGSQ NALIAPGALG SEPTASGQRV TVPLLIDGQL
241 QTPEQFQQIV LRANPDGSSV KLGDVARVEL GSQAFWFKTR SNGKPVALVA VQLAPGANAV
301 ATSAAVSERM AELAKAMPQN ITYRIPFDTA PYVRISIEKV VTTLIEAMVL VFLVMFLFLQ
361 KFRYTLIPAI VAPIALLGTF SIMLIAGFSI NVLTMFGMVL AIGIIVDDAI VVVENVERIM
421 AEEGLSPLEA TRKAMTEITG AIIGITLVLT AVFIPMAFSS GSVGAIYRQF TISMAVSILF
481 SAFLALTLTP ALCATLLKPV HGHEEKRGFF GWFDRKFDAM ANGYQSWVAK LLKRTGRMMA
541 AFAVVLVLLG VGFMSVPSAF LPEEDQGYYL TLFQLPPDST AERTLEAINV LEKHSVGRQG
601 VADIEAVQGW GFTGAGSNVG IAFTILSPWG EREGATAAGE VAAANQATSV VREGMIMSVM
661 PPSIDGLGTT SGFSLRLEDR AGHGNAALMA AQFQLLGMAA KSPALVGVYP EGLPPGSAIK
721 LEIDRQKAQA LGVPFESIAA TLGTAMGSTY VNDFPSNGRM QQVIVQAEAS ARMHLEDVLK
781 LYVRNSGGQP VPLAEVVTPK WEQSPLQLVR YNGYPAMRIS GAAAPGHSSG EAMAEMERLA
841 AQLPPGFAVE WSGQSLQEIL AGDEALVLMA LSMLVVFLVL AALYESWAIP LSVMLVVPLG
901 LIGAVAAVLL RGFPNDVFFK VGLITLIGLS AKNAILIVEF AKSAREQGMS TIDATIHAAR
961 LRLRPILMTS LAFTLGVVPL MIAGGASKET QQAIGTGVFG GMISATALAI FFVPVFFVVV
1021 LGLVERLRRR RKAGPAAEQT VEG
//