LOCUS BAK65319.1 840 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative ABC transporter permease
protein protein.
ACCESSION AP012222-644
PROTEIN_ID BAK65319.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_06440"
/transl_table=11
BEGIN
1 MTALPWRTAW RMARRDLSGG FRGLRLLFIC LFLGVATLAA IGSLTAAITG EIAERGQSIL
61 GGDIEVEMSQ RELGETDKAA LRALGTLSET IRMRAMARRL GPAAPGAPES VLTELKGVDG
121 RYPLYGTLTL AAGRYAPLPA DRILIGPALA ERLIIRTGDR LRYGDADFTV AGIIADEPDR
181 VGEGFTLGPV AIVSMEGLRR TGLIQPGSLF QSKYRIRLPE GADAAALRKE LEQRYASEGW
241 EYKDRDRAAP GTNRFIDRMG QFLSLIGLTA LIIAGIGVSN GVASYLALRR GSLATLKVLG
301 ATSADIERIY LLQIGAVATV AILLGLGVGA LVPPLVVALA GDVLPVQPGF RLHPLPLVTS
361 AAYGMLVALI FTLPPLARAR TEPVAAILRA LVDPPRTRDR RTLLLVGGAL AALVAIALGT
421 AREPLFSAAV LGATAAVLLL LLLLGQAISR IARRLRRPRR PLLRLAVANL YRPGAQTSAL
481 VVALGLALTL FVTLAGIQTS LDAEIERTVP RKAPNLFVLD LPSTGEADFR RIVAERASDA
541 TLNIVPSLRG TVVAYGGQRV ADLETRPDGA WILRGERGVT YSATLPEGSE LVEGQWWPAD
601 YAGPPLLSLD EEQARALGVG VGDTMVVSVL GREIEARIAS LRRINWDTMG FNYVLVFSPS
661 GLASAPHSLT ATITMPPGRE NAMTQALLGA FPGVSVIAVG EMIEQISGIL DQMASAILTA
721 ASITILAGIA VLVGAIAASR QSRSYDSVIL KMLGATRGQV LGAQALEYGL LAAMLAGVSL
781 LLGMGAAWFV IVQVFEFGWA PDWGVVLLTL GGGALLTLGI GLAGSVPLMS VRPASALRQL
//