LOCUS BAK65285.1 439 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative M20A family peptidase protein.
ACCESSION AP012222-610
PROTEIN_ID BAK65285.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_06100"
/transl_table=11
BEGIN
1 MIHFPRAARL LALPLLALAA SPAAAKLSAA EQRMVRSVEA QQEEAIALLE RMVNQNSGTR
61 NIPGVIKVAE MVRPELETLG FTVTWKPMDA TGRAGHIIAT HSGKPGTKRL LLIGHLDTVF
121 EESSPFQRFE RKGDTATGPG IGDDKGGVVV MLMALKAMKD AGTLRDANIE VVLTGDEESV
181 GEPIDAARAD LIAAGKRADA ALDFEGLVTI DGQDYGSIAR RSSTSYTIRV TAKSGHSSGI
241 FGQVGDGAIY EVARIISTMR KELPEPNLTF NIGLVAGGAQ AELAANDASV SASGKTNIIP
301 AQAVATGDYR ALTPEQAARV RQKIEQIVAA HGPGAQATIS FKEGYPPMAP TEGNTALLTR
361 LNAVNGDLGL PAMPALDPLR RGAGDIGFVA ADVDGLAGLG PDGAGSHAPG ESVDLPSFQR
421 QAKRAALLMS RLSREPSAR
//