LOCUS BAK65245.1 318 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 4-hydroxy-3-methylbut-2-enyl diphosphate
reductase protein.
ACCESSION AP012222-570
PROTEIN_ID BAK65245.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.17.1.2"
/gene="ispH"
/locus_tag="SLG_05700"
/transl_table=11
BEGIN
1 MAASLTLPPL HVLIAAPRGF CAGVDRAIMI VERALEKFGP PVYVRHEIVH NRFVVDGLRA
61 RGAVFVDELD EVPDGRPVVF SAHGVPKLVP AHAQARGLDY LDATCPLVSK VHRQAERQVE
121 AGRHILFIGH ANHPEVIGTF GQVPEGTMTL IETEADAEAI TPAPGQSLAF LTQTTLSVDD
181 TASIVAILQR RFPDIAAPKG EDICYATSNR QAAAKEIAAR AQAVLVIGAP NSSNSLRLVE
241 VAERCGARAR LIRSADDLDF EWLGDIATLG LTAGASAPEV LVRGVIDALG QRFAITEEEV
301 RTSTEVISFK LPRGLEAA
//