LOCUS BAK65240.1 712 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 peptidyl-dipeptidase Dcp protein.
ACCESSION AP012222-565
PROTEIN_ID BAK65240.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="3.4.15.5"
/gene="dcp"
/locus_tag="SLG_05650"
/note="protein synonym:dipeptidyl carboxypeptidase"
/transl_table=11
BEGIN
1 MHARFVLTSL TALAAVFATP AMTQTSNSIT AEWTGPYGGV PAWDKVKVAD FPPAFEAMMA
61 SIKADFEKVV SSKAAPTFDN TIAAMQKETL DDRVMPIWGV YTSNLSNDEV RALQRDWSPK
121 LSAFYSQLTL DPRYFPRVKA LYDKRATLGL DAKQMRLLER TYDNLVANGA QLDAAQKKEL
181 VRLGTELAQL YSTFSNNLLA DEEKYLTFTS EADLAGLERD FIATMKSAAE ERKVQGWVLV
241 NTRSFVSPFL ESSTRRDLRE TVFKAFANRG DNGDAHDNNA VIAKIVALRA ERAKLLGFPT
301 HAHFRMRDTM AGTPEKAMDL MMKVWPAAVA RVHQEVADMQ AIADEEAKAG KGPRIVIEPW
361 DYRFYAEKVR KAKYDLDQNE VKPYFQLDKM VAAMFDAAGR LYGFSFTENT GKVPVFHPDI
421 RTFEVTRNGK VVGLFYLDTW ARTGKRSGAW MTTYKSQNHL NDSEYVLASN NNNFAKGQPG
481 QPTLISLDDA STLFHEFGHA LHYLSYDITW PGLGGTPRDF VEYPSQVNEN WLLTPYVLET
541 YARHYQTGEA IPQALLDKIE ASKTFNEGFS TVEYLSSAIV DMKLHNRATA PTDIDAFERE
601 TLAEIGMPKE MIMRHRLPQF SHLFSSDAYS AGYYSYLWSE TMDADTWAAF EETGNVWDPA
661 TAKRFNATLL STGNETDRAE AYRAFRGRDP DVNALLRRRG FPVPGEAGEK GK
//