LOCUS BAK65172.1 1047 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 efflux pump inner membrane protein protein.
ACCESSION AP012222-497
PROTEIN_ID BAK65172.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_04970"
/transl_table=11
BEGIN
1 MRNISAWCIR NPVPPIVIFL GLLLAGIISF MNMAVVDNPD IDFPAVEITI TQPGAAPTEI
61 ETQITQRIES AVRGINGVDE IQSTAREGSS DTFVQFQIGI DPNVAVQEVK NAVDQIRSDL
121 PDGILEPFVQ KVDVGGAEIA YYSVQASDMT IEQLSWFVDD TVAKRLLSIP GMARVGRGGG
181 VDREIRVILD PVKMQSLGVT ATQINQALRQ VNLNAAGGQA EIAGSRQSVR VLANAQSAYD
241 LGQTQISLGN GRSVLLSELA TVTDGYGEQK RMAKVAGKQV VNFSIERAKG ASDVNVYDET
301 MRVLKSLEET NPGVKFYQRF TSVNYTKNQY NSSMHAIVEG AVLAVIVVFI FLRDWRATVI
361 SAIAIPLSAI PTFFFMDIMG FNLNFLSLLA LGLVAGVLVD DAIVEIENIV RHMRMGKTAY
421 QASIDAADEI GLAVVATTMS IVAVFLPVGL MPGISGQFFK NFGFTVVISV LISLAVARMI
481 TPMIAAYFLE HHGEEKHGEG WLMDRYMGLL AWALDDRRAK AYASGGGFGR RITAKFLDHR
541 LWMMGFGLGA FVLTIVLLMT MPQQFEPNQD NDFSRINIEM VPGTTLRQSE AVADRVAALI
601 NAQPEVENAM ANIGEGNARI FITLKKDRKR SSIELERELA PRLAEFPDAR VTFASQQGGF
661 GTGRDISVML NGSDPKVLEE TAAKLAEEMK SIPEVVAPRV NADMQRPELI IRPRLDLAAQ
721 LGVTTTSLSQ AIRIATLGDI DQNSAKFSLS DRQVPIRVML PESSRRNLST IENLPVQTAG
781 GGSVPLSRVA EISFGAGPTT IQRYAQQRRI FVGADLARGA VKGPVMNKIN ELPTMKNLPA
841 GVTNQAVGSD RWQQELIVNF IVAVASGVML VFAVLVLLYK RFISPLVNMC SLALAPLGGL
901 LFLLVLGEPI SLPVYIGLLM LLGIVAKNSI LLIDFALEEM DRGVPKFEAI MEAGHKRAQP
961 IVMTTVAMTA GMVPTALSLT GDGAWRSPMG ITVIGGLVLS TLLTLAIVPA AFSLADGLEK
1021 RLGPWLRRRF LTYDGREDTP AATHPAE
//