LOCUS BAK65167.1 731 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 UvrABC system protein B protein.
ACCESSION AP012222-492
PROTEIN_ID BAK65167.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="uvrB"
/locus_tag="SLG_04920"
/note="protein synonym:excinuclease ABC subunit B"
/transl_table=11
BEGIN
1 MAIQIRTTLD EPQTGDSFVP HRPARPEKAE GGRKFRLVSD YEPAGDQPTA IAELVEGAMA
61 GEKDQVLLGV TGSGKTFTMA KVIEAVQRPA LVLAPNKILA AQLYGEFKSF FPDNAVEYFV
121 SYYDYYQPEA YVPRSDTYIE KESSVNEAID RMRHSATRAL LERDDVLIVA SVSCLYGIGS
181 VETYSAMTFS LKKGQVADQR EIVRKLVALQ YKRNDAAFAR GNFRVRGDNL EIFPSHYEDN
241 AWRISFFGDE IEEIVEFDPL TGKKAASLDY IKVFPNSHHV TPGPTLKQAM EAIRHELTER
301 LKELVEEGKL LEAQRLEQRT NFDLEMIAAT GSCAGIENYS RFLTGRLPGE PPPTLFEYLP
361 ENAVLFVDES HQTVPQIGAM ARGDHRRKVT LAEYGFRLPS CIDNRPLRFN EWDAMRPQTV
421 SVSATPGPWE MEQTGGTFSE QVIRPTGLID PPVEIKPVED QVDDLINEAR ITAAKGYRTL
481 VTTLTKRMAE DLTEFMHEAG LKVRYMHSDV ETLERIELIR DLRLGVYDVL VGINLLREGL
541 DIPECGLVGI LDADKEGFLR SETSLIQTIG RAARNVDGRV ILYADRITGS MERALNETGR
601 RREKQMAYNL EHGITPESVK KQIGDIIAHV SSKDQVTVET GLEDAPHLVG HNLRAYIEEL
661 EKKMRAAAAD LEFEEAGRLR DEIRKLEAEE LGLPADQQVT AGAGRYQGRA TEGKPGTRKM
721 RYGKTQRKMG R
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