LOCUS BAK65129.1 652 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 ABC transporter substrate binding
protein precursor protein.
ACCESSION AP012222-454
PROTEIN_ID BAK65129.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_04540"
/transl_table=11
BEGIN
1 MRTSRNDEAR GSGRERRAPP AGVRSWLARA LGLSLLLATT TSDLAALPDQ PDVTTAHGYA
61 VFGELKYPAD FKHLDYVNPD APKGGTYRYA QTGSFDTLNF FGLLGTPPFA LLWIYDTLMQ
121 RSLDEPASYY PLIAETISYP RDLAWVEFRL DPRARWHDGR PITPEDVIFT VAKFKELVSP
181 TYRRIGAAVS RVEKAGPRSV RLYFVQKGNP TMPTVVAAMP VVPRHIWQGK DFTASTLERP
241 VGSGPFRIGR MSPGRWLEME RVKDYWAKDL PINKGKWNFD IIRHDFYRDV GVMNEVFLSG
301 QADLRFEGSA ARWDAQDQMP AFRAKNLVRD VIRYENGAFY MGLMMNSRRP FLADRRVRKA
361 ITLAYDYEWV KRVLLAGHHG RLASFFANTE FAAEGLPGED ELALLAPFRD QLPPELFTQP
421 PELPVAGQWG SRRENLVQAA ALLREAGYRI DDGLLIDPRT RQPVRLGLAA YSALMDRQVS
481 LFIENMRQLG ITVDFRSYDT AQFRHKIRNF DFDLMINLPT FPPLVTPGLE LMQFWSSQAA
541 DTPQSFNYMG VRSPVVDALV MKVGTATDRA TVVSAMRALD RVLLWDYYAI PFQHTYPAPM
601 GQVPITYWNR FGRPAKDPTY NFPFLTMDHW WIDKEKEARL TYGDFGRRAQ GK
//