LOCUS BAK65125.1 598 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative glycoside hydrolase protein.
ACCESSION AP012222-450
PROTEIN_ID BAK65125.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_04500"
/transl_table=11
BEGIN
1 MTATLDLWPI GNCQVSALVD RAGRFVWGCL PRVDGDPTFS SLLDPAARAA PGARGFWEID
61 LEDCVETTQR YIRNTPVLVT RHCDAAGNAI EVTDFCPRFF RSGRMYRPVA FARIVRPVAG
121 SPRIRVRLRP ARNWGASDPG HTRGTNHVRY LLDTMTLRLT TTAPVGWIED ERLFRVERPL
181 HFFLGPDESF GEDLRLALDS MLDRTVREWQ GWVRGLATPV EWQDAVIRAA ITLKLCQHEE
241 TGAIVAALTT SIPEHANSGR NWDYRYCWIR DAYYTVQALN RLGALDVLET YLEYLRNIVD
301 NARGGHIQPL YGVGGEATLR EWIAPGLEGY RGMGPVRVGN QAAEQVQHDA YGQIVLSNTQ
361 SFFDQRLLRM GGIEDFHALE AVGERAWAVY DKPDAGLWEL RTRAHVHTYS SAMCWAACDR
421 LANAATALGL TERAEFWQAR ADVIRAAIER EAWRPDTNRL SATFGGDDLD ASIIQLLDLR
481 FLAPDDPRFL GTLEAVEEGL RRGSHMLRYA TEDDFGLPAT AFNVCTFWLI EALHATGRIG
541 EARVLFEEML SRRTAAGLLS EDIDPVTGEL WGNYPQTYSL VGLINCAVLL SKPWSAIR
//