LOCUS BAK65118.1 1070 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 YapH-family protein protein.
ACCESSION AP012222-443
PROTEIN_ID BAK65118.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_04430"
/transl_table=11
BEGIN
1 MRCYLLASTC CVALASAATA ETTITTKQTA PVRTSTIKSG APDDIKITSA GSLELTTAGP
61 AITVDSANKV TNEGTIQIAN TDDARGIVAL AGTSGGIVNT GKIVLDESYA PTDGDNDGDI
121 DGPFAVGKNR IGIHVGGAYT GDIASDFGGS IAIEGNDSFG IRLDGPLNGK LTHNGSTTVL
181 GDRAVGIQAG AINGSVRLAG TVATVGLGAV GARFDGPIDG TLTIQGAITS TGYRYTTPPA
241 DTSKLDADDL LQGGSAVIVA DNVAGGIILA VPPKDNSTTD NDEDKDGIED SKEGSAAVRS
301 YGAAPAMRIG SATKDIAIGA VPATGTGYGL IIDGTIAGSG LYKDVTGTGL SVGGLGGSVT
361 IAGGIGVSGT VSASSVNTSA TAIHLGAGAS TPLIHVTGTV SVSGSSAANT VAGGIVVDAG
421 ASLPTIRNAG SIKAATTGED GTAVAIWDRS GTVGLVENAG TIAATGAKAD SGRNVAIDLS
481 ANNSGATIRQ TQVAAGITAP SITGNIHFGG GNDVLDVADG TVTGNTSFGT GADTLRLSGD
541 AIYKGDVDFG TGGATMTLTG TAQFQGKADF RGEASTLGIA TGSIFSGSLA NAGALALTVN
601 GGALDLTAPA AIGSLAVSDK GILAVTLSDA GNTTPILDVA GTASFAADSR LVLRVTDVEN
661 AEGNHLVLRA GTLTGASNIT ADTALVPWLY KASLSSTANA LNVALARKST TELGLNRSEA
721 AAFDAIYAAL GKDAKVEGTF LSIMNEETFG LQMQQMLPDH AGGIFSAVTQ GSRLFAGMLQ
781 DPTGPFKDEG KWGYWINQVA WGVEKDRGDT SAFENSGWGI GGGGEIKTGL GSFGGSLAYL
841 WSRNRGTETA NQTNAKQFEL AAYWRLKSGG LRATARGSMS FIDLDGSRAF EGMNGTEKVS
901 LTANSDRGAR LYSGFGSLSY DWVSTGGISF RPVVALDYYR LHEKAYTETG GGDAYNLAVR
961 SRTSDELAVT GSAVVGLDMG GADQWSGWSR FELEAGRREI VSGNLGKTVA RFASGGEEFT
1021 LLPDDRESGW IGRLRGLAGN SAFQIGGELG AEQHQGNWAL SLRASLRVGL
//