LOCUS BAK65116.1 645 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 quinoprotein glucose dehydrogenase protein.
ACCESSION AP012222-441
PROTEIN_ID BAK65116.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_04410"
/transl_table=11
BEGIN
1 MRRSMALMLS AALLAQTAQA QSGSAPPPGD WPRYARDLGS TRFSPLRQID RGNVGRLSQA
61 WSFRVRPEGG GGLVGSSTPI AVDGVLYLPI GNAVVALEGH TGKELWRHPV KGLARRTVSW
121 WPGDGTLGPR LFYSNGASIT ALDPRTGEID TGFGKDGSVA LGVPYASPPT VYKNVLVVGA
181 NVAEMLVGPS GNSRAYDART GEKLWEFNTV PQPGEVGHET WLDDGWKGRS GTNVWVWYMT
241 VDEKTDTLYM PVGGPSANYY GGDRPGANLF GNSIVAVDAL TGKYRWHFQT IHHDLWDSDL
301 PAPPVLYDAK VGGRTVQALA ETGKPGLMYI LDRHDGKPVF GVEEKPVAAA DVPGEWYSPT
361 QPIPVKPRDL VRNHWTPEDI VSAADTNEAH AAACRALLES YGGTFFNAGP FTPFFLHEEG
421 GPVKASINLP NNGGSNWGGS AVDPESGLIF INVSEGGSIG FMEKRKEGAD YGRGTAGSEQ
481 LYDRASLSGP GAYSTFTASY EDENGRKVTM PCIRPPWGRL IAVDGKTGEI AWATRLGVSD
541 DLPEDRKDTG RNNGFGGPIV TAGGLVFIGA TDDRRFRAFD ARNGKELWAA KLEYSAQAVP
601 ITYQGKDGRQ YVAIMAGGWG AVSGPQGAGG KPSNNESLMV FALPK
//