LOCUS       BAK65079.1               317 aa    PRT              BCT 07-OCT-2016
DEFINITION  Sphingobium sp. SYK-6 ribosomal large subunit pseudouridine
            synthase D protein.
ACCESSION   AP012222-404
PROTEIN_ID  BAK65079.1
SOURCE      Sphingobium sp. SYK-6
  ORGANISM  Sphingobium sp. SYK-6
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (bases 1 to 4199332)
  AUTHORS   Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
            Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
            Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
            Masai,E., Yamazaki,S. and Fujita,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2011)
            Contact:Director-General Department of Biotechnology
            National Institute of Technology and Evaluation, Biological
            Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
            Japan
            URL    :http://www.bio.nite.go.jp/
REFERENCE   2
  AUTHORS   Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
            Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
            Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
            Fukuda,M., Yamazaki,S. and Fujita,N.
  TITLE     Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
            Degrader of Lignin-Derived Biaryls and Monoaryls
  JOURNAL   J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: phred/phrap v. 0.020425.c
            Genome Coverage       :: 8.0x
            Sequencing Technology :: Sanger ABI3730
            ##Genome-Assembly-Data-END##
            
            Please visit our web site.
            URL:http://www.bio.nite.go.jp/
            
            DOGAN ; Database of Genomes Analyzed at NITE
            The database contains genome sequence data, physical maps
            and the genomic and proteomic data of the microorganisms
            analyzed.
            URL:http://www.bio.nite.go.jp/dogan/Top
            
            Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
            of Bioengineering, Nagaoka University of Technology.
FEATURES             Qualifiers
     source          /db_xref="NBRC:103272"
                     /db_xref="taxon:627192"
                     /mol_type="genomic DNA"
                     /note="strain coidentity: NBRC 103272"
                     /organism="Sphingobium sp. SYK-6"
                     /strain="SYK-6"
     protein         /EC_number="5.4.99.-"
                     /gene="rluD"
                     /locus_tag="SLG_04040"
                     /note="protein synonym:rRNA pseudouridylate synthase D"
                     /note="protein synonym:rRNA-uridine isomerase D"
                     /transl_table=11
BEGIN
        1 MTEGVVSFSA EITPALAGVR LDRALATLVP TLSRERVKAL ILAGHVRGPG GRPVSDPALK
       61 VKADTAFALA VPEAAPAEAQ PQKIALVIPY EDEDLIVIDK PAGMVVHPAA GNPDGTLVNA
      121 LLHHCAGRLS GIGGVARPGI VHRIDKDTSG LLVVAKSDAA HEGLARQFKD HSIERRYLAL
      181 VNGVPAPAAG TVDQWIGRSD ADRKKMAVQR AGRGKHAVTH YRTLQKLDRA ALIECRLETG
      241 RTHQVRVHMA HIGHPLLGDP VYSRGGPHKA LLGELGFRRQ ALHAAFLGFV HPVTRKAVQF
      301 DSPITDDMQQ LFSHLRV
//