LOCUS BAK65054.1 1071 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 efflux pump inner membrane protein protein.
ACCESSION AP012222-379
PROTEIN_ID BAK65054.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_03790"
/transl_table=11
BEGIN
1 MLSRIFIDRP ILAWVLATIV MLSGIGAIYS LPIAQYPDIA PPQVSISANY PGASAEAVQN
61 SVTQVIEQSL NGIDGLLYFT SSSDARGRAN ITATFDKGTD PDIAQVQVQN QLQSVIARLP
121 QQVQQSGVQV RKANSDMLLI VGFYDASNRM SAQQVSDYLS SNLQDTLSRV PGVGNVNVFG
181 SPNAMRIWLN PERLTSFQLM PGDVIAAIQA QNTEVAAGQL GAEPSAPDQY LNVNVTAQAR
241 LQTPEQFRDI VVKTLPTGAT VRLGDVARVE IGADNYTVTI HVNGHPGAGV AFMLAPGADA
301 LTTAELIKAR VAELSDTFPE GFEYGFAQDT TAFIKLSISE VTKTLIEAII LVVIVMFVFL
361 QNWRATLIPT IAVPVVLLGT FGVLYVAGFT INTLTLFGLV LSIGLLVDDA IVVVENVERL
421 MAENPGMTAR EATIRSMREI TMALIAIALV LSAVFMPMAL FGGSTGVIYR QFAITIVSAM
481 ILSVFVAIIL SPALTAHLLK PHRESDAIRE GDRSWMERRL PRVHGWLLRA RDGFNSRFDR
541 GIDHYVAAVR KIVDRRGLSL AIYALVVLLL VVMFQRLPTG FLPNEDQGVG IVSFQLPTGA
601 TINRTAEVQK VVEDYFAEHE SGTVATLFTV AGTSGPGGAI GQNVGRGFIM FKPWEERPGP
661 ENTAEAVSRR ASGALSGLRD AQIFALTPPA IPGLGQSTGF EAQILNTGNL SAADFAAARD
721 KVVAAARADP ELAAVRLQEL PDQAALRVDV DHQKLAALGL NQSDVNLTLS SAWGGRYIND
781 FVDRGRVKRV YVQGDAPYRA KPEDLGQWHV RGGNGQMTPF ASFATLSWSM TPPSLSRFNG
841 IPSYQLLGQA APGYSSGEAM RRIEQHVEDI PGIGLAFSGL SYQERLLQGQ GPLLYALSLL
901 VVFLFLAALY ESWSIPIAVL LIVPLGLVGA VLAVTLRGLI NDIFLQIGLL TTMGLAAKNA
961 ILMIEFAEQA EKRGMRIIDA AAEAARRRLR PILMTSFAFI FGVLPLAVST GAGANGRIAI
1021 GTAVIGGMLT ATVLAIFYIP LFFVIVRRLT RDTLQRISER IVARRAGRKE P
//