LOCUS BAK65053.1 462 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 efflux pump outer membrane protein protein.
ACCESSION AP012222-378
PROTEIN_ID BAK65053.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_03780"
/transl_table=11
BEGIN
1 MRRALPLAAC LLAGCSLAPA YERPAAPVQA QWPGDAAALA DQAGLPAADY RTLFRDPRLI
61 ALIDIALENN RDLRQAAANV ARARAQFRIQ RADLFPQLDA GADVVRGNQA GGETRTTATA
121 DLSVTAYEID LFGRIRSLTD AARENYLATA ADAQAVRLAL IGDIAQAWLT HAADASLLEI
181 SRLTAETAQR TEALTQARLA SGIAPRSDLR QAQTILATAQ SDMARYTTAI AQDRNLLALL
241 VGAPVDPALL PGGIEEAGET IDAPLPGTSS EVLLRRPDIM AAEHDLRAAN AQIGAARAAL
301 FPRVTLGALF GLVGSSLDGL FGSGGTQLQQ GAAGITWPIF QGGAARAGVA ASQAQRDALL
361 AAYEKAIQTA YREVADALAR QATIDDQLGA DRLRVQASED AAYLVDARYR GGIDSFLAAL
421 DAQRSLYTAR RTLVASLLEA AGNRVTLYRA LGGEMMPAPP AP
//