LOCUS BAK65008.1 418 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 gallate dioxygenase protein.
ACCESSION AP012222-333
PROTEIN_ID BAK65008.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="desB"
/locus_tag="SLG_03330"
/transl_table=11
BEGIN
1 MAKIIGGFAV SHTPTIAFAH DANKYDDPVW APIFQGFEPV KQWLAEQKPD VTFYVYNDHM
61 TSFFEHYSHF ALGVGEEYSP ADEGGGQRDL PPIKGDPELA KHIAECLVAD EFDLAYWQGM
121 GLDHGAFSPL SVLLPHEHGW PCRIVPLQCG VLQHPIPKAR RFWNFGRSLR RAIQSYPRDI
181 KVAIAGTGGL SHQVHGERAG FNNTEWDMEF MERLANDPES LLGATVTDLA KKGGWEGAEV
241 VMWLLMRGAL SPEVKTLHQS YFLPSMTAIA TMLFEDQGDA APPAESDEAL RARAKRELAG
301 VEEIEGTYPF TIDRAVKGFR INHFLHRLIE PDFRKRFVED PEGLFAESDL TEEEKSLIRN
361 RDWIGMIHYG VIFFMLEKMA AVLGIGNIDV YAAFRGLSVP EFQKTRNAAI TYSVAGKQ
//