LOCUS BAK64908.1 502 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 exodeoxyribonuclease VII large subunit
protein.
ACCESSION AP012222-233
PROTEIN_ID BAK64908.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="3.1.11.6"
/gene="xseA"
/locus_tag="SLG_02330"
/note="protein synonym:exonuclease VII large subunit"
/transl_table=11
BEGIN
1 MEEGPVRFDT SGRLLAQERQ GDNLAALSVS ELSSLLKRTV EDRFGHVRLR GEISGWKRAA
61 SGHAYLCLKD DAALIDGVMW KGTAGRLAFA PEDGLDVIVT GKVTTYPGRS KYQIVIDSME
121 LAGEGALMQL FERLKAKLAA EGLFDPARRR PIPMLPRVIG VVTSPTGAVI RDILHRLADR
181 FPSRVLLWPV LVQGEGAAAQ VASAVRGFGA LPADGPIPRP DVLIVARGGG SIEDLWTFNE
241 EIVVRAVAAS PIPVISAVGH ETDTTLCDFA ADLRAPTPTA AAEMAVPVRA ELLAQVAELG
301 ARMGRCVSRG IDRSRERLEA QRRLLPRPDV LLDLARQRAD ELGDRLRRGL AHRLSNARHE
361 LANATGALRP ALLDARVAHA RQTLSATRLT PALLERRLAD AHRQFDALWR LAQSLNPDAP
421 LKRGFARVMA NGALVRTSTE ALAARHVMLK FADGEIAAVT GGDGAAPRAP AVNAPASAPR
481 TTGGTRARKA DPPPGAQTDL FD
//