LOCUS BAK64867.1 381 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 4-hydroxy-3-methylbut-2-en-1-yl
diphosphate synthase protein.
ACCESSION AP012222-192
PROTEIN_ID BAK64867.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.17.4.3"
/gene="ispG"
/locus_tag="SLG_01920"
/note="protein synonym:1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase"
/transl_table=11
BEGIN
1 MSEHNPGLRP WRDIARRECR QIMVGNVPVG GGAPVTVQTM TNTPTSDARA TIDQIRRCED
61 AGVDLIRVSC PDVESTAALK QIVRAARVPI IADIHFHYKR ALEAADAGAA CLRINPGNIG
121 SAARVKEVVD AAKANGCAIR IGVNAGSLEK HLLEKYAEPC PEALVESALD HIRLLQDQDF
181 HEYKVAVKAS DVFLAVAAYM QLAEAVDCPL HLGITEAGGL IGGTVKSAIG IGNLLWSGIG
241 DTIRVSLSAE PEEEVRVGYE ILKALGIRTR GVRVVSCPSC ARQGFDVIRT VEALETRLQH
301 IHTPLSLSVL GCVVNGPGEA RETDIGITGG GNGKHMVYLS GVTDHHINDA EMIEHIVRLV
361 EAKAAEIEAA NGANADPVAA E
//