LOCUS BAK64784.1 665 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative two-component system hybrid
sensor and regulator protein.
ACCESSION AP012222-109
PROTEIN_ID BAK64784.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_01090"
/transl_table=11
BEGIN
1 MTEDAQGLDD SADELPRWRR WVPFVLAVVF AIALACLIYL AGHAADLRDR AIALQRHSYQ
61 VMLQAKTVEA RIGSAETLLA RYVISHDAAV GRQFQDEWGT AMRELVALER STRGNARQSA
121 AVARLRAAMT DRGSTLTEIA LRVRYQQSLG ALGQLEATRK EASVRTIADA LKTVADLAEA
181 ERARHNVQVN QSQSRVNRLN DSYSVIGLGL FLAAIGALWF ASAALNERRY ARRLAAAEAA
241 RVDNLEAAVL QRTEELREAN AKLYREMEER IQAEQSLRQL QKMEALGKLT GGIAHDFNNM
301 LAVVVGGIDV ARRQMGKDPE KAITHLDSAI EGANHAAALI ERLLAFARAE PLLPDQVDID
361 RLIAGMEDLL ARAIGGGVRV ELALDAGDWP VWVDRAQLES ALVNMAINAR DAMDGRGTLT
421 IATERLTLEE QEIGQCAAGD HVCLSVTDTG TGMTPDVLER IFEPFFTTKA IGKGTGLGMS
481 QIFGFVSQCR GAIDIRSAPG EGTCVRLLLP RLAEGRGFGA TSPAAGAFAP ADAAGPAGGG
541 LTILVVEDDP RVLRSTLAAL AALGHASLPC DHPGKAAELL EAHPDIDLIL SDVLMPDMSG
601 PEMIETLGAV LAQRPVIFVT GFAGDKGMTA QLAGFPILRK PFTVAQLAQA IADAVAPGHD
661 GKAAA
//