LOCUS BAK64767.1 763 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 DNA topoisomerase IV subunit A protein.
ACCESSION AP012222-92
PROTEIN_ID BAK64767.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="5.99.1.-"
/gene="parC"
/locus_tag="SLG_00920"
/transl_table=11
BEGIN
1 MTDIPDPLDS IKDHPFDSAL SERYLVYALS TITARSLPDL RDGLKPVHRR LLWAMRLLRL
61 EPSGPAPDVL VANPERNNTS YKKCARVVGD VIGKYHPHGD ASVYDALVRL AQDFSLRTPL
121 IDGQGNFGNI DGDNAAAMRY TEARLTQAAA DLMTGLDQGT VDFRPTYNGE EEEPEVFPGL
181 FPNLLANGAA GIAVGMATSI PPHNVAEVID AASLLIDNPA AEHGELMQLM RGPDFPTGGL
241 LVDPPSVISD AYETGRGSLR VRARWHREDE GRGTWIAVID QIPYGVAKGK LIEQIAQLIA
301 DKKLPILADV RDESDEVLRI VLEPRARTVD PDVLMDSLFR LTDLESRFPL NMNVLDASHT
361 PRVLGLKPLL TAWLAHQIEV LVRRSQHRID QIDNRLELLD GYIIAFLNLD RVIEIIRTED
421 EPKPVMMAEF QLTDRQAEAI LNMRLRSLRR LEEMELRRER DSLAAEREEL HKLVESPARQ
481 KTRLKKDLAE LRRRYTPEKG IGARRTGLEQ AAPAREIPLE AMIEREPITV IMSQRGWIRA
541 MKGHVDLDAT EALKFKEGDG PAFAFHAQTT DKLLLAGSDG RFFTLGADKL PGGRGFGEPV
601 RLMVDLANET GIVALLPARP EGRLLLAASD GRGFVASMGE IVAETRKGRQ VVNLKGNATL
661 KVVRPIAADA DSIAVIGENR KLVIFSLAEL PEMARGQGVT LQRYRDGGLS DATALTLAQG
721 LSWTMGGERG RVRTETDLLP WRAARGAAGR MPPNGFPRNN RFD
//