LOCUS BAK64734.1 690 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 oligopeptidase B protein.
ACCESSION AP012222-59
PROTEIN_ID BAK64734.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="3.4.21.83"
/gene="ptrB"
/locus_tag="SLG_00590"
/note="protein synonym:protease II"
/transl_table=11
BEGIN
1 MNDIPRPPIA AQRPHQTIHH GRTLEDPWAW LRDPGYPDVT DPAVLDYLKA ENAYFESHMA
61 AKKPMVDALF AEMKARIKEE DRSVPQKDGD YVYWSSFETG EQYRRHWRRR VGAPEDGSAD
121 ELIVDEPAMA AGKDYFRLGG VAISNDDRLL AYAVDDSGAE RYTVRIKDLA TGEILPDVIP
181 DVLSALVWTQ DDSGLVYAPA NAQWRTDRAM LHRLGTGAQE DVLLYHEKDE GFRVSVGLSA
241 AEDWIIIATG DHVTSEVRLV PATDPQAAPV LVSARVPERE YDVDVHGEWL YIRTNDTHPN
301 FRLVRAPLAA PDRWEEVLPP SDHFYLTDVS LFRDFYVTEG RENGLDQIEI RDYATHAARR
361 IDFPEASYVA GLDDNPEYHV TKLRISYESM VTPDTVLDYN LADGHREILK VQEIPSGFDP
421 ALYATDRLLI PARDGTSIPV SILHRRDFPM DGSRPLYLYG YGAYGIAIEP GFGTTRLSLV
481 DRGFAFAIAH IRGGDDLGQQ WYKDGKLEKR TNTFNDFVDV AKGLIAQGYT SAGRIATSGG
541 SAGGELMGAI VNSDPELWGA VVAHVPFVDV LNTMLDETLP LTPGEWPEWG NPIEDAAAYD
601 LIASYSPYDN VKPQVYPPML VTAGLNDPRV TYWEPAKWVA RLRATKTDDH LLLLKTNMEA
661 GHGGKSGRWE SLRETAEEFA FILWQLGVDA
//