LOCUS BAK64722.1 506 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 hypothetical membrane protein protein.
ACCESSION AP012222-47
PROTEIN_ID BAK64722.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_00470"
/transl_table=11
BEGIN
1 MSQKAGDPVE RTEGDDIAAL AKGGRANVFG FVLRLAARVP FLFIAGRLYG ASVLGRFAYA
61 VLVIEFAAQL ATFGLKRGLA EQLAKDARPQ SHVVADALLL CLIGSCATAG LLLIFPEAMF
121 PNSGLNGLDR LLPLIVIAIA MTDIALAGCA YQFNIAASVR ARSIVEPWTI SIASLGFYFY
181 SARDGLILAY VLAMLAAFAT SLWPLLRHYG LPREWRPHPG RLWHLAIRNL PLAAADAIEW
241 GSRRLDLAIL GLFATPYVVG IYYVAQQVAS LPQKLKTSFE PILGPVITRN IRLGNHAAIA
301 RQVSQVGFWI VAAQLGVALA LGIPGEAVMG LVGPTFVGGA IALACLLAAE VLAAPAVVSE
361 AALVYLARMR NLTISVLAIA LQAGLTVLLI LAARRLALPD LYIAAMPALA LALALACGAL
421 AKSWLLGRLL HERVRIWRAS LVICGLVVAI AGMSLTLLPA RFEWIELVIG IPAMLGVYSL
481 LIWRFAFKDA DRTLFRKKAL QDPANA
//