LOCUS BAK64709.1 574 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 inner membrane protein OxaA protein.
ACCESSION AP012222-34
PROTEIN_ID BAK64709.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="oxaA"
/gene_synonym="yidC"
/locus_tag="SLG_00340"
/transl_table=11
BEGIN
1 MNDKRNIILA VVLTIAILFG WPVISGYFFP QLNQPAPRPA ASAPADPASD AAPVPGAPGA
61 PGAAQAMRSL PQALRDAPRV AIETPKLRGS INLRGARIDD IVLPTHKQTI EKDSPPVRLF
121 SPSGTKDAYF ASFSWSGEGM KLPGADTVWT PDRQTLTPQS PVTLRWDNGS GQRFLIRLSV
181 DNDYMITAAQ TVENAGTGAV VARPYGLLSR LGHSRDPSTW TIHTGPVGVF NGSANYDVDF
241 ATLDKEGDQR FATRGGWLGF TDLYWHAALI PAQTLPVEAQ FRSGADQRYQ ADMTYGPVAL
301 APGKTVTTTS RLFVGAKETP VLERYADQEG VQLFDRAIDW GWFRWFEKPI FYLLDWLFRM
361 IGNFGVAIIC LTFIVRGLMF PIAQRQFASM AAMRAIQPKM KAIQERYKDD KVKQQQEIME
421 LYRSEKVNPL AGCLPIFLQI PIFFALYKVL MLAVEMRHQP FYLWIKDLSA PDPLHILNLF
481 GLLPFTPPSF LGIGLLAVIL GITMWLQFKL NPAPMDEMQK QIFSIMPWVM MFIMAPFAAG
541 LLIYWCTSNI LTIAQQWWLY RQHPVLGQPA AEAK
//