LOCUS       BAD22121.1               585 aa    PRT              PLN 16-FEB-2008
DEFINITION  Oryza sativa Japonica Group unknown protein protein.
ACCESSION   AP005384-5
PROTEIN_ID  BAD22121.1
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 112773)
  AUTHORS   Sasaki,T., Matsumoto,T. and Katayose,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2002)
            Contact:Takuji Sasaki
            National Institute of Agrobiological Sciences, Rice Genome
            Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
            URL    :http://rgp.dna.affrc.go.jp/
REFERENCE   2
  AUTHORS   Sasaki,T., Matsumoto,T. and Katayose,Y.
  TITLE     Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2, BAC
            clone:OJ1212_D02
  JOURNAL   Published Only in Database(2002)
COMMENT     Genes were predicted from the integrated results of the following:
            GENSCAN (http://CCR-081.mit.edu/GENSCAN.html), FGENESH
            (http://www.softberry.com/), GeneMark.hmm
            (http://opal.biology.gatech.edu/GeneMark/), GlimmerM
            (http://www.tigr.org/tdb/glimmerm/glmr_form.html), RiceHMM
            (http://rgp.dna.affrc.go.jp/RiceHMM/), SplicePredictor
            (http://bioinformatics.iastate.edu/cgi-bin/sp.cgi), sim4
            (http://globin.cse.psu.edu/html/docs/sim4.html), gap2
            (http://www.tigr.org/software/glimmerm/), BLASTN and BLASTX. The
            genomic sequence was searched against NCBI NonRedundant Protein
            database, nr (ftp://ncbi.nlm.nih.gov/blast/db) and the cDNA
            sequence database at RGP or DDBJ. Protein homologies of the coding
            regions were searched against NCBI NonRedundant Protein database
            with BLASTP. ESTs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no. and RGP clone ID.
            Full-length cDNAs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no.
            
            A gene with identity or significant homology to a protein is
            classified based on the protein name to indicate the homology
            level such as same name, 'putative-' and '-like protein'.  A gene
            without significant homology to any protein but with full-length
            cDNA or EST homology (covering almost the entire length of partial
            sequence) is classified as an 'unknown' protein. A gene predicted
            by two or more gene prediction programs is classified as a
            'hypothetical' protein according to IRGSP standard. A gene
            predicted by a single gene prediction program is also classified
            as a probable 'hypothetical' protein and is included as a
            miscellaneous feature of the sequence.
            
            The orientation of the sequence is from -21M13 to M13rev of the
            BAC clone. This sequence of OJ1212_D02 clone has an overlap with
            OJ1568_B05 (DDBJ: AP004092) clone at 5' end and with OSJNBa0038P01
            (DDBJ: AP006457) clone at 3' end. The sequence was generated by
            combining Monsanto and RGP-Japan sequencing data. Detailed
            information on overlap and assembly quality together with
            annotation of this entry is available at
            http://rgp.dna.affrc.go.jp/GenomeSeq.html
FEATURES             Qualifiers
     source          /chromosome="2"
                     /clone="OJ1212_D02"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="genomic DNA"
                     /organism="Oryza sativa Japonica Group"
     protein         /gene="OJ1212_D02.6"
                     /note="contains full-length cDNA(s): AK072807"
                     /note="similar to Oryza sativa chromosome 4,
                     OSJNBa0081L15.3"
     intron_pos      32:1 (1/9)
     intron_pos      68:2 (2/9)
     intron_pos      133:0 (3/9)
     intron_pos      178:2 (4/9)
     intron_pos      275:0 (5/9)
     intron_pos      310:2 (6/9)
     intron_pos      359:0 (7/9)
     intron_pos      425:1 (8/9)
     intron_pos      506:2 (9/9)
BEGIN
        1 MEPPSGIRAS AWSFFKFLPF FLGLLLLGII KGALLFPWAW LIMMIGISAL VLGLWPMHVI
       61 WTYYCIIRSK LVGPVVKLLL LVAASVILVL WLIVGIVGSV LIGVVYGFLA PVMATFDAVG
      121 EGKERPLYHC FVDGTWSTIT GSCTVVRDLK DLLLHSYFSI MDDLRFHAPP GGEPYEIRVL
      181 DIPGALFAAA CGFLVDGIMF TLIAFYKFPV MLFKGWKRLI EDLVGREGPF LETACVPFAG
      241 LAILLWPFAV FGAFLASIIS SIPLGAFAAV VVYQESSLIM GLNYVISSVA IFDEYTNDVL
      301 DMAPGSCFPR FKYRKNEAST EGGSLSRPAS FKDKQDGKKA PSRVTSFKGS FDEFNPFKLL
      361 DHLFEECKHR GEVLVAEGVI TPKDIEETKS GKIGIGVLNV GLPAYVILHA LIRSAKANSD
      421 GLILSDGSEI TSDNRPKNTI FDWFFDPLMV IKEQIKAQNF TEEEEAYLKK RVLLTSDPKR
      481 LKEVVPHLPS SLNERKQAEI DALSRRLQGI TRSISRYPTA KRRFDDLVRS LSEELERTMG
      541 GSQSGSVSQM QKLRSGISRM LSQRSMGKRT SNRGDDREAQ LTIDP
//