LOCUS       BAD01700.1               514 aa    PRT              PLN 16-FEB-2008
DEFINITION  Oryza sativa Japonica Group putative glucose-1-phosphate
            adenylyltransferase protein.
ACCESSION   AP004459-14
PROTEIN_ID  BAD01700.1
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 150200)
  AUTHORS   Sasaki,T., Matsumoto,T. and Yamamoto,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-DEC-2001)
            Contact:Takuji Sasaki
            National Institute of Agrobiological Sciences, Rice Genome
            Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
            URL    :http://rgp.dna.affrc.go.jp/
REFERENCE   2
  AUTHORS   Sasaki,T., Matsumoto,T. and Yamamoto,K.
  TITLE     Oryza sativa nipponbare(GA3) genomic DNA, chromosome 8, PAC
            clone:P0410E11
  JOURNAL   Published Only in Database(2001)
COMMENT     Genes were predicted from the integrated results of the following:
            GENSCAN (http://CCR-081.mit.edu/GENSCAN.html), FGENESH
            (http://www.softberry.com/), GeneMark.hmm
            (http://opal.biology.gatech.edu/GeneMark/), GlimmerM
            (http://www.tigr.org/tdb/glimmerm/glmr_form.html), RiceHMM
            (http://rgp.dna.affrc.go.jp/RiceHMM/), SplicePredictor
            (http://bioinformatics.iastate.edu/cgi-bin/sp.cgi), sim4
            (http://globin.cse.psu.edu/html/docs/sim4.html), gap2
            (http://www.tigr.org/software/glimmerm/), BLASTN and BLASTX. The
            genomic sequence was searched against NCBI NonRedundant Protein
            database, nr (ftp://ncbi.nlm.nih.gov/blast/db) and the cDNA
            sequence database at RGP or DDBJ. Protein homologies of the coding
            regions were searched against NCBI NonRedundant Protein database
            with BLASTP. ESTs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no. and RGP clone ID.
            Full-length cDNAs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no.
            
            A gene with identity or significant homology to a protein is
            classified based on the protein name to indicate the homology
            level such as same name, 'putative-' and '-like protein'.  A gene
            without significant homology to any protein but with full-length
            cDNA or EST homology (covering almost the entire length of partial
            sequence) is classified as an 'unknown' protein. A gene predicted
            by two or more gene prediction programs is classified as a
            'hypothetical' protein according to IRGSP standard. A gene
            predicted by a single gene prediction program is also classified
            as a probable 'hypothetical' protein and is included as a
            miscellaneous feature of the sequence.
            
            The orientation of the sequence is from T7 to SP6 of the PAC
            clone. This sequence of P0410E11 clone has an overlap with 
            OJ1119_B10 (DDBJ: AP004645) clone at 5' end and with P0404D10
            (DDBJ: AP004396) at 3' end.  Detailed information on overlap and
            assembly quality together with annotation of this entry is
            available at http://rgp.dna.affrc.go.jp/GenomeSeq.html
FEATURES             Qualifiers
     source          /chromosome="8"
                     /clone="P0410E11"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="genomic DNA"
                     /organism="Oryza sativa Japonica Group"
     protein         /gene="P0410E11.123-2"
                     /note="contains EST(s): AU172987(E60080),AU075787(E60080)"
                     /note="contains full-length cDNA(s):
                     AK071826,AK058246,AK058551"
     intron_pos      83:0 (1/8)
     intron_pos      182:0 (2/8)
     intron_pos      272:0 (3/8)
     intron_pos      332:0 (4/8)
     intron_pos      366:2 (5/8)
     intron_pos      404:0 (6/8)
     intron_pos      437:0 (7/8)
     intron_pos      477:0 (8/8)
BEGIN
        1 MAMAAAMGVA SPYHAAHAAA STSCDSLRLL VAEGRPRRPR GVASSSSSSS SAGRRRRPLV
       61 FSPRAVSDSK SSQTCLDPDA STSVLGIILG GGAGTRLYPL TKKRAKPAVP LGANYRLIDI
      121 PVSNCLNSNI SKIYVLTQFN SASLNRHLSR AYGNNIGGYK NEGFVEVLAA QQSPDNPNWF
      181 QGTADAVRQY LWLFEEHNVM EFLILAGDHL YRMDYEKFIQ AHRETDSDIT VAALPMDEKR
      241 ATAFGLMKID EEGRIVEFAE KPKGEQLKAM MVDTTILGLD DVRAKEMPYI ASMGIYVISK
      301 NVMLQLLREQ FPGANDFGSE VIPGATNIGM RVQAYLYDGY WEDIGTIEAF YNANLGITKK
      361 PVPDFSFYDR SAPIYTQPRH LPPSKVLDAD VTDSVIGEGC VIKNCKIHHS VVGLRSCISE
      421 GAIIEDSLLM GADYYETEAD KKLLGEKGGI PIGIGKNCHI RRAIIDKNAR IGDNVKIINV
      481 DNVQEAARET DGYFIKSGIV TVIKDALLPS GTVI
//