LOCUS ANM63694.1 992 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pre-mRNA-processing protein 40B protein.
ACCESSION CP002686-3683
PROTEIN_ID ANM63694.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PRP40B"
/locus_tag="AT3G19670"
/gene_synonym="ATPRP40B"
/gene_synonym="pre-mRNA-processing protein 40B"
/db_xref="Araport:AT3G19670"
/db_xref="TAIR:AT3G19670"
intron_pos 12:0 (1/27)
intron_pos 35:0 (2/27)
intron_pos 147:0 (3/27)
intron_pos 194:0 (4/27)
intron_pos 219:2 (5/27)
intron_pos 243:0 (6/27)
intron_pos 260:2 (7/27)
intron_pos 280:0 (8/27)
intron_pos 388:2 (9/27)
intron_pos 412:0 (10/27)
intron_pos 452:0 (11/27)
intron_pos 475:0 (12/27)
intron_pos 501:0 (13/27)
intron_pos 530:0 (14/27)
intron_pos 541:2 (15/27)
intron_pos 577:0 (16/27)
intron_pos 604:0 (17/27)
intron_pos 635:0 (18/27)
intron_pos 653:0 (19/27)
intron_pos 692:0 (20/27)
intron_pos 725:0 (21/27)
intron_pos 741:0 (22/27)
intron_pos 772:0 (23/27)
intron_pos 808:0 (24/27)
intron_pos 829:2 (25/27)
intron_pos 861:0 (26/27)
intron_pos 955:0 (27/27)
BEGIN
1 MANNHQYPGI QPFQHPNASS IDLPRGFAPP MNFQFLPTIQ APQSEQVARL SSQNFQCVGR
61 GGTVLSIGYP PQSYAPQLLQ SMHHSHERPS QLNQVQVQHV PLGPPTLISQ PNVSIASGTS
121 LHQPYVQTPD IGMPGFGGPR ALFSYPSATS YEGSRVPPQV TGPSIHSQAQ QRASIIHTSA
181 ESSIMNPTFE QPKAAFLKPL PSQKALTDWV EHTSADGRKY FFNKRTKKST WEKPVELMTL
241 FERADARTDW KEHSSPDGRK YYYNKITKQS TWTMPEEMKI VREQAEIASV QGPHAEGIID
301 ASEVLTRSDT ASTAAPTGLP SQTSTSEGVE KLTLTSDLKQ PASVPGSSSP VENVDRVQMS
361 ADETSQLCDT SETDGLSVPV TETSAATLVE KDEISVGNSG DSDDMSTKNA NQGSGSGPKE
421 SQKPMVESEK VESQTEEKQI HQESFSFNNK LEAVDVFKSL LKSAKVGSDW TWEQAMREII
481 NDKRYGALRT LGERKQAFNE FLLQTKRAAE EERLARQKKL YEDFKRMLEE CVELTPSTRW
541 SKTVTMFEDD ERFKALEREK DRRNIFEDHV SELKEKGRVK ALEDRKRNII EYKRFLESCN
601 FIKPNSQWRK VQDRLEVDER CSRLEKIDQL EIFQEYLRDL EREEEEKKKI QKEELKKVER
661 KHRDEFHGLL DEHIATGELT AKTIWRDYLM KVKDLPVYSA IASNSSGATP KDLFEDAVED
721 LKKRDHELKS QIKDVLKLRK VNLSAGSTFD EFKVSISEDI GFPLIPDVRL KLVFDDLLER
781 AKEKEEKEAR KQTRQTEKLV DMLRSFKDIT ASSSWEELKH LVEGSEKCST IGDESFRKRC
841 FEDYVSLLKE QSNRIKQNKK VPEDVREEHD KGRDKYGREK DRVRERDSDD HHKKGAAGKY
901 NHDMNEPHGK ERRRSGRDSH NRHRERHTSV KENDTDHFKE SHKAGGGHKK SRHQRGWVSE
961 AEVEGKEKRR RKEEAREHTK EEELEDGECG RY
//