LOCUS ANM62715.1 1758 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GW repeat- and PHD finger-containing
protein NERD protein.
ACCESSION CP002685-1506
PROTEIN_ID ANM62715.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NERD"
/locus_tag="AT2G16485"
/gene_synonym="F16F14.1"
/gene_synonym="F16F14_1"
/gene_synonym="Needed for RDR2-independent DNA
methylation"
/db_xref="Araport:AT2G16485"
/db_xref="TAIR:AT2G16485"
intron_pos 617:2 (1/9)
intron_pos 644:1 (2/9)
intron_pos 706:0 (3/9)
intron_pos 999:1 (4/9)
intron_pos 1042:0 (5/9)
intron_pos 1062:0 (6/9)
intron_pos 1079:0 (7/9)
intron_pos 1102:2 (8/9)
intron_pos 1153:1 (9/9)
BEGIN
1 MDSDSERASL ESIKDNSECV HVSNEPNLTA TCVDSSVGEE GVTDVNSSAA VSELVPPEQG
61 EGALLNSVPE ISERGIPVDV VSSVDGGGEE NAAFNIQEID SVGGDAAAVE EVPLKSSSVV
121 GEGREEEAGA SIVKEEDFVA EANLSGDRLE ENKEVSMEEE PSSHELSVCE VNGVDSLNDE
181 ENREVGEQIV CGSMGGEEIE SDLESKKEKV DVIEEETTAQ AASLVNAIEI PDDKEVACVA
241 GFTEISSQDK GLDESGNGFL DEEPVKELQI GEGAKDLTDG DAKEGVDVTE DEMDIQVLKK
301 SKEEEKVDST TELEIETMRL EVHDVATEMS DKTVISSAVV TQFTGETSND KETVMDDVKE
361 DVDKDSEAGK SLDIHVPEAT EEVDTDVNYG VGIEKEGDGV GGAEEAGQTV DLEEIREENQ
421 ELSKELAQVD ETKISEMSEV TETMIKDEDQ EKDDNMTDLA EDVENHRDSS VADIEEGRED
481 HEDMGVTETQ KETVLGKVDR TKIAEVSEET DTRIEDEDQE KDDEMTDVAE DVKTHGDSSV
541 ADIEEGRESQ EEMTETQEDS VMADEEPEEV EEENKSAGGK RKRGRNTKTV KGTGKKKEED
601 VCFMCFDGGD LVLCDRRGCT KAYHPSCVDR DEAFFQTKGK WNCGWHLCSK CEKTATYLCY
661 TCMFSLCKGC AKDAVFFCIR GNKGLCETCM ETVKLIERKQ QEKEPAQLDF NDKTSWEYLF
721 KDYWIDLKTQ LSLSPEELDQ AKRPLKGHET NASKQGTASE TDYVTDGGSD SDSSPKKRKT
781 RSRSKSGSAE KILSSGDKNL SDETMEWASK ELLDLVVHMR RGDRSFLPML EVQTLLLAYI
841 KRYNLRDPRR KSQVICDSRL QNLFGKSHVG HFEMLNLLDS HFLKKEQNQA DDIQGDIVDT
901 EEPNHVDVDE NLDHPVKSGK DKKRKTRKKN VRKGRQSNLD DFAAVDMHNI NLIYLRRSLV
961 EDLLEDSTAF EEKVASAFVR LRISGNQKQD LYRLVQVVGT SKAPEPYKVG KKTTDYVLEI
1021 LNLDKTEVIS IDIISNQDFT EDECKRLKQS IKCGLINRLT VGDIQEKAIA LQEVRVKNLL
1081 EAEILRFSHL RDRASDMGRR KELRECVEKL QLLKSPEERQ RRLEEIPEIH ADPKMDPDCE
1141 SEDEDEKEEK EKEKQLRPRS SSFNRRGRDP ISPRKGGFSS NESWTGTSNY SNTSANRELS
1201 RSYSGRGSTG RGDYLGSSDD KVSDSMWTSA REREVQPSLG SEKPRSVSIP ETPARSSRAI
1261 APPELSPRIA SEISMAPPAV VSQPVPKSND SEKIWHYKDP SGKVQGPFSM AQLRKWNNTG
1321 YFPAKLEIWK ANESPLDSVL LTDALAGLFQ KQTQAVDNSY MKAQVAAFSG QSSQSEPNLG
1381 FAARIAPTTI EIPRNSQDTW SQGGSLPSPT PNQITTPTAK RRNFESRWSP TKPSPQSANQ
1441 SMNYSVAQSG QSQTSRIDIP VVVNSAGALQ PQTYPIPTPD PINVSVNHSA TLHSPTPAGG
1501 KQSWGSMQTD HGGSNTPSSQ NNSTSYGTPS PSVLPSQSQP GFPPSDSWKV AVPSQPNAQA
1561 QAQWGMNMVN NNQNSAQPQA PANQNSSWGQ GTVNPNMGWV GPAQTGVNVN WGGSSVPSTV
1621 QGITHSGWVA PVQGQTQAYP NPGWGPTGHP QSQSQSQVQA QAGTTGSGWM QPGQGIQSGN
1681 SNQNWGTQNQ TAIPSGGSGG NQAGYWGNQQ QSQNGDSGYG WNRQSGGQQN NFKGQRVCKF
1741 FRENGHCRKG ASCNYLHN
//