LOCUS       AMU96677.1               794 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 conjugal
            transfer protein TraD protein.
ACCESSION   CP013342-3713
PROTEIN_ID  AMU96677.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_18925"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_013832747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKRNLVNFTR GSQLLGHFSF MFAAGLKGPL IIAAIGISWT SWWTISAGLS DHEAYLVWMR
       61 IYAAIYGFME FDPAKQVALE TGFGGTVQLP IIMLDAYPPV INAWDHLLDL LGDALVRSAL
      121 LLVPAFVLFY WFAARFGSSS KERKHERGAM LVTLPELVDE LRGHNQRERA RELSSAMGWK
      181 WHLCSPKELS AAFPYRPSHL ATVVYPWRLE QSHAMLIGTT GMGKTVAMSD MIAEARAKGQ
      241 RCVVFDLTGA FIEHFYQADR DIILNPLDAR CPQWSLFDEC RTEGEFWAAA EALVPHDGGG
      301 EAQFWVIAAR ALFVEFCLKL VAEGRGTNAA LARELMTADL SRVHAMMRGT IADPLTAPEA
      361 ARMAESIRAV FNVNAKALKL LPTSGRRFSV RDWIEEGAHD DEGTNAKRSG SMVFISARYV
      421 DMSVCAQLLT LWLDTAMNTL MTMPRTKDLK CWFFIDELGA LHRLPALEKG LQTARNFGGA
      481 IVTGIHAYAK LKEVYGENMA MTLASLARTK LILGTADRET ATWCSDFIGH RQVRDMEEGY
      541 TYGYNNARDA VSLTPRKHIE PLLLPDQLMN LPRLSGFIKF PDGFPAAPVR LKPIDRERIA
      601 HVFVGRAKDR QPIRQVEGKS KGGVTDTNPP ANQSEHPSSN DDGAGKPVVP KQGTLPLEPV
      661 VEADAKQSRQ QAAKRAEKDI PDDPRKVSGK SGHRRKSPPE AHKATPRNSR PLLPTSAALR
      721 KGDHPDEKDP PNSVKEGRRS DLPRANPLSD KPQAVDRTAQ RQREAEARKL MLEDGVPEQD
      781 QPSHEGPDLG DFEL
//