LOCUS AMU96605.1 715 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-3641 PROTEIN_ID AMU96605.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_18565" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_016745433.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSGWHRAIIA NGLLAGTCVA ALLILLFLAI DVDRGFEENA RLRQDVSDSY DARAALQAVL 61 NRHLDIELGQ RGYVITGDAG FLQPYLTAEE SIDANLDSFA KLAGRGQAAL VAELRRESAE 121 KRRFVSRTID EVEKGRRAAA AGLIAGGAGK ASMDRIRALV ARISETERAR LEKRTAIAEA 181 ARQSLRQRTF VLLVGLILLL ALSAILIARS QAARNKAYRR AQDLAARQEA IFDSAKDGMI 241 VLNPSGSIES LNPAAAAMFG VTHESLLRRD IGSLFEIAPD RGQIETFLRR LSANRKANPG 301 QIQEFIGRRS DGTSFPLEVS VSPVALMDAT LFLAVIRDIS GRREVEQMKS EFVATVSHEL 361 RTPLTSIAGS LGLISGGAAG DVSPKVGRLV EIAHSNAARL VRLINDILDI EKIEAGRMPF 421 DIRPLALAPI LDEAMHQMAG FAREYGVTIR IEPLASDTAV LADEDRLMQV VSNLLSNAIK 481 FSPRGEIVKV RVTALDRRSR ISIIDRGAGI PEAFRSRIFG KFAQADASDS RQKGGTGLGL 541 SIVREIVVRL GGSVSFESEE GKGTVFHVDL PTAGLPGAAP KKEEGQTSAH DASLPTILHV 601 DDDPDMLTVV ASMFEDRAQV HSTPSVAQAR GLVRRHRYDG AILDVGLLDG CGTDLAIPLR 661 KQSGAIPIIL FTAQEVDAAV EGIDLVLVKS RASLELLVRE TLERIGGASE LEKGR //