LOCUS       AMU96543.1               555 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 cytochrome
            C oxidase subunit I protein.
ACCESSION   CP013342-3578
PROTEIN_ID  AMU96543.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_18235"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003050220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTDIAATAPA HGHDHAHDHD HDTPSFFVRW FMSTNHKDIG TLYLIFAIIA GIVGGALSGM
       61 MRLELAEPGI QYLPGWAHML GGAADATAGK HFWNVMITAH GLIMVFFMVM PAMIGGFGNW
      121 FVPLMIGAPD MAFPRMNNVS FWLTAVAFVM LCGSMFVPGG SGLGAGTGWT VYAPLSTSGS
      181 VGPAVDMAIF SLHLAGAASI LGAINFITTI FNMRAPGMTL HKMPLFVWSV LVTAFLLLLA
      241 LPVLAAAITM LLTDRNFGTT FYDATGGGDP LLYQHLFWFF GHPEVYIMIL PGFGIVSQII
      301 STFSRKPVFG YLGMAYAMVA IGVVGFIVWA HHMFTVGMSV NLKMYFTAAT MVIAVPTGIK
      361 IFSWIATMWG GSISFKTPMV WAIGFIFMFT VGGVTGVVLA NGGVDTNLHD TYYVVAHFHY
      421 VLSLGAVFSL FAGFYYWFPK MSGRMYNEFL GQLHFWIFFI GVNVLFFPQH FLGQQGMPRR
      481 YPDYAEAFAY WHYISSFGYV IMAVGMIFFF VNIAWSLFAG KKAADNPWGE GATTLEWTLS
      541 SPPPFHQFNE LPRIA
//