LOCUS       AMU96407.1               915 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 helicase protein.
ACCESSION   CP013342-3442
PROTEIN_ID  AMU96407.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_17545"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003047666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MAPDPLSLPA IHASHVGIWI ADASGRVQRV GRGEAIAAVA ATPHVLLGAT LTGDRLGYPE
       61 LSGLDLLELF AFLFPARFAV PTPAGIAAAT DIAPPASEAD VAAFLPRAAA AMLDRAGDAA
      121 WPEREGAWHG LQALSRQRWP WAPLLQPRIG APERSERWLF ARLPEWEETA PRPQPRQVTV
      181 NPDDVTARLD GLTGDGAERR AGQRDYARAA TAIFEPRERR DRPQMLVAEA GTGIGKTLGY
      241 LSPAKQWIDQ SGGSVCVSTY TKALQRQLAR ETERLYPDAR THREKVVVRK GRENYLCLLN
      301 LEDALQGGFS GRAAVLAQLV ARWAAYTRDG DMVGGDLPGW LPALFRRNGT TALTDRRGEC
      361 IYAGCPHFRK CFIERSTRAA AQADIVIANH ALTMVQAVRP RDGGAPATRL IFDEGHHLWD
      421 AADSMFAAAL TGQEAIEIRR WVLGPEGKSR GRRRGLAARL ADVASYDEAG DKAIHAAIEA
      481 AGQLPGDGWL ARIAENDPWG AIERLLVAAR GQVYARGTDP KNADSGYGLE TELADPGPDL
      541 VAAAADASDA IEALLRPLMT LGKRLDALVD DPPDWLDGQA RARVDGARAS LGTRIDTLGA
      601 WLSLLGRVGG PADPDFVDWL AVDRFDGREY DIGLHRHWLD PARPVADIVY APAQGVLVTS
      661 ATLRSGAQAT GDAGSGWTDA DIRTGARHID GGVRHFAVPS PFDYARQAEV LIVTDIARGD
      721 LPALAGAYSR LIEASGGGAL GLFSAIRRLR IVHARIADRL ARAGLPLYAQ HVDPLDTGTL
      781 VDIFRADPHA SLLGTDALRD GVDVPGESLR LVIMEGVPWP RPTILHAARR AAQGGGAYDD
      841 GVIRARIGQA FGRLIRRADD FGQFVMLSPS FPSRLLSAFP AGTPVRRLPL DEAVNHVAAA
      901 NGEQRKRAFA AFSPS
//