LOCUS AMU96368.1 1148 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-3402 PROTEIN_ID AMU96368.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_17340" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_010125509.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRTMLAGIWA VFWLVAALPA AAQIVPDLSP ATAEKVAEND RKELAADLAD RAAISERTLK 61 LIAADRGEKS APYLAKLLVH ANNLSWAHRA PESRQALVRA VEIATALYGA GTYATADVER 121 QYAIALRVNG YREEAIEPFS HYVHALTEEA YGCGRRVPGM VMGCARDDTD LGDTLLEYGQ 181 MLNDVGRGGE AVAAFDTVIA RFEPRWAGCE GPAWGTRCDR ARDKRADMLS SYAALLALVG 241 RADDAGALRK RLFDDSLAAI DACTGDDCEG PDFRLVRRYY DYRAALAGAN HPDDALALDE 301 RILAILVASP HYTKGKAGSG EYFDKDMVND VTGIAEAYAK AAVAAGKADR ARDQLARYGF 361 GALVGTQLAG IDFDAEQKAI EAERRTLSSY GDEIERIANS RRKVALFAGH YGKDSDEYAK 421 ALRDLAWDLD DLPVNDTEAE AVYREALAVE RKAFGAGDFR TLHALDNLTT FLKKRDRSAA 481 AIAVLADVLG DPANDHLALY LDPDRRSARR GSFGDPDDTL NALKADLSEL LLRNRGDPAL 541 ALAAARHAAL GMTSFRDALG FDRFDEMKLD WVTADPWAWL GERRYADYFL LYADALWAKG 601 VHDGAAAEQA FTALQDAMAG TTSRAVARAA AERAAARASV SPLVEERRRI DAEIAALNTK 661 LETLPDDPAE RQRQFSTLQS EIARKDDRRA QVDAAITAAT PDYFALIRPR PLAIAEAQAL 721 LAPDEAFVML VPSEFGTHVL LVTHDALRWN RADMPAAEVN AHVRRLLWDV GASIDVTAEE 781 DAKWSAEGEG DFPFDRGTAW LLYDRLLSPF AADLAGKRHL FTAATGSLSS LPLGILVTEK 841 PTGADGDPAV LRATKWLADG PALLQLPSLQ SLQLLRAVAA RDEGQAGTRM VGFGDPVLEG 901 RAAARGIASA RARGTRSSGL PVTAGLQPAI GDAQPLADPA ALRRLARLPG TEAELKAMQA 961 LLGADAARLY LAGTATETNL KRSDLEHLSV LFLATHGLIA GEVKGLAEPG LVFTPPATAT 1021 PLDDGLLTAS EVAGLHLGAR WVVLSACNTA SGDGSEGAPG LSGLARAFFF AGAESMLASH 1081 WPVRDDVASV LTVRLFELMQ KNPGLSRAEA LQHAMRDIRN DPRADDFLKS WSHPSAWAPF 1141 SLIGDGID //