LOCUS       AMU96295.1               921 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 DNA gyrase
            subunit A protein.
ACCESSION   CP013342-3329
PROTEIN_ID  AMU96295.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_16970"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003043883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTEENTHLPP SDDGISPINI VDEMKTSYLD YAMSVIVSRA LPDVRDGLKP VHRRILYAAQ
       61 EGGFIPGRPY KKSAKIVGDV MGNYHPHGDS AIYDALARMT QDWSLRVPLI DGQGNFGSMD
      121 PDPPASMRYT EARLAKTAMV LLNDLDKDTV DFQPNYDASR EEPTVLPARF PNLLVNGAGG
      181 IAVGMATNIP PHNLGEVVDA TLAMIDRQLE GGPDITLEEL MAIVPGPDFP TGAMMLGQGG
      241 ARNAYATGRG SIMMRATHII EEGRNDRQSI VLTSIPFQVG KSGLVEKIAE AARDKRIEGV
      301 ADIRDESNRE GVRVVIELKR DATAEVVLNQ LWRHTPAQSS FPANMLAIRG GRPEMMGLKD
      361 ILSAFIAFRE EVITRRCKFE LAKARDRAHI LLGLVVAVSN LDEVVRIIRG SNSPAAAREA
      421 LLAREWPIGE IAPYIRLVEA IEGEMEDTAT YRLSEIQVKA ILDLRLHRLT ALGRDEIGKE
      481 LGELATEIEE LLSILADRVK LYGVMREELV AVRDEFATPR KTLVAPAADG IDDEDLIERE
      541 EMVVTVTLDG YIKRTPLDTF RAQRRGGKGR AGMATKDEDV VTELFVTSTH TPVLFFSTAG
      601 KVYRMKVWRL PEGGPATRGR PMINLLPLAQ GETISTVLPL PEDEGEWGKL HVMFATAKGS
      661 VRRNSMDAFT NVPSNGKIAM KFEGEDEDDR LIGVALLDES DDVLLATRQG KAIRFAGDDV
      721 REFQSRNSTG VRGMRLADGD EVISLSILHR VGTSSEEREA YLRAAPWKDN ENAPTLPADR
      781 MDELAAREQF ILTICANGYG KLSSAYEYRR TGRGGQGITN IDNIGRNGPV VASFPATQAH
      841 QLMLVTDQAK LIRMGLDSLR VIGRGSAGVR LFDVAKDEHV VSAALIEDSE DEALDAADAP
      901 AEATEAVAGG TTDAGPDGAG E
//