LOCUS       AMU96264.1              1162 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 DNA polymerase
            III subunit alpha protein.
ACCESSION   CP013342-3298
PROTEIN_ID  AMU96264.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_16810"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003043731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MAYSPFVPLR VFSSFTMLEG AIEPKAIAKA ARERGFPAIA VADRNGLYGV MAFGDACKAA
       61 GVQPIVGALL SVARPGQRLA SGAPLIDWIA LYAQDDAGYN NLCALVSAAH LGRPVEQEPH
      121 VLLSDLAGKT DGLICLTGGG EGALARLLAG EQKTAADEYV EQLEALFADR LYIELSRRGD
      181 ATEKAAEEAL IELAYTRALP LVATNPANFV DPQFHPAHDA MLCIAQSAYV ESEDRRSSNP
      241 EAWLKSAEAM EDSFSDLPEA IRNTLVIAQR CAFMAPKRKP ILPSLAGDRE GEAAQLKVDA
      301 HAGLAERLAL YPDLTEEEKQ AYVARLDFEV DVITQMGFPG YFLIVADFIK WAKAHDIPVG
      361 PGRGSGAGSL VAWSLTITDL DPLKLGLLFE RFLNPERVSM PDFDIDFCET RRGEVIRYVQ
      421 EKYGRDTVAQ IITFGKLKAR AVLKDTGRVL QMSYGQVDRL AKLVPNHPTD PWTLERALNG
      481 VSELMTEYKQ DDGVRRLFDM ARQLEGLPRH SSTHAAGVVI GDRPLDQLVP LYRDPRSYMP
      541 VTQFDMKYVE TAGLVKFDFL GLKTLSVLKE ARRLLALRGI DVDLDTLGWD DPAVYELLQR
      601 GDTVGVFQLE SEGMRRTLSA VKPTNFGDII ALVALYRPGP MDNIPLFGAR KNGREPIAYP
      661 HPLLEGILAE TYGIFVYQEQ VMQAAQILAG YSLGGADLLR RAMGKKVQAE MDAQRDTFVK
      721 GCGEHNGIDA KAANELFDLI DKFAGYGFNK SHAAAYALLS YQTAWLKAHY PHEFFAASMS
      781 FDSHQTDKLS IFIDDMRRLD IAIAPPSIND SEADFSVGRS EDGLAVRYAL GALKGVGEKA
      841 MEALVAERQA KGDFASLDDF AARIDPKLLN RRQIEALAGG GAFDCVEPDR PRAFAGAEAL
      901 LACANSSAHE RSTGQGGLFG GDVAIAPVLQ LSAAEPWTLA ERMAKEKDAF GFYFSAHPVE
      961 QYEAVIAARG ARTYGNICET VEMTPGTRIP MVMAAMVESA RPRVSQRGNR FLNLTLSDRS
     1021 GQFQSSCFDE QTGKILEALA VDGGCALLNV ELDLLEGEET PRVTVRGAQS LADIAASAAL
     1081 QLDCRVELAE APGEMLRYLE RREDARGRVI VSTTDPLTGE DIRIELGRGF ALGPDTVSRL
     1141 QMVAGVTDVA LSLVPPRDFR VR
//