LOCUS AMU96175.1 745 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-3208 PROTEIN_ID AMU96175.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_16345" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_008995503.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MEAESSQTGT WRYERVAIGG GGYVTGMRIA GKGTDRTRVC RTDTAGGFIW LTAENRWQPL 61 LQAGINIDPE LMRYQYPRGA GCYDAAVAPS RTECIYLCQS GFVYVSLDRG KSWRRTTLPY 121 YDGYGANSGS RATNERLAVD PVNHLIVGIG NPDTGARGGL HISFDGGDSW AAHPQIPAPS 181 APDRGMAIAF DPDSGRTGER TRLVYVWSYG HGIFRSVSGI QGHFDLIEGS PSDIGHMVAR 241 DGNLWTGGTS RGDGAPLRRW TERVGWIAVP GVPDAKHIAI SPDGKRIVSM IASSAYRLSL 301 DGGATFGPLT PRVRRKAVHI GWHETTNENY MSNGACVWDT EEDILYIAEG IGCWKCIGPP 361 HDGSVPVYLE DSVGIENLVS MQILVPPKNS RIHYVTQDRN VATRDWWQFR QYPANIGVSN 421 AVPLDHGGGI DHAAGNEDYL AVVSSKNGCC NISRDGGKSW APVATVPRNV RATAPQPATE 481 GTGFGGNIAV GPPGNMVWLP TGNNKPSVTF DDGASWAYCL FDGAEPENSG MRWHNQYSYQ 541 RIQLLADKER PGTFFLYHVG NERHDETSQR FRGIWKSEDG GRNFRRMRKD LIGPIYGTDA 601 FNCKLKMTPG RSPHLFFCVG DVDANDTDSD IGLFFSADEG SSWSRVAGVR EPLDFAFGKA 661 APGSDYPTLY AWGGLAGLRG LHRCIEFDPR RPGAAKWQTI GHYPGGSMDN GTVLAADMQE 721 FGLVYLGLGG SGMFRAVSEA SLRLG //