LOCUS AMU96063.1 1050 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-3094 PROTEIN_ID AMU96063.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_15760" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003044125.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSEAETVRAR RRRKAPWIVG GALGALALGL WVARAPIADR FIQDQLAKKG VPARYTIERI 61 GLSTQRLSNV VIGNPAHPDL TARVLEVSVG LGLSGPYVAS VRADGLRLYG RFVDGQLSLG 121 ALDKFRDPTD KSPFALPDMA VRLSDARARL ETPWGNVGAA LNGGGNLRRD FAGTLALVAP 181 HIAAADCRGT GITFYGKLAV RDVRPRLTGP LRGAAVTCGG AQPVAVAAPQ IALDVSLAEN 241 LQQWDGTADA LVQRLMMPAL AAERVGVKGR FTGTADRTGL TLVADVAKLA GPDFAASGVH 301 LEGKGAVGNV TPNFDGRLRF ADASASARLR RSVADSAAAL GGTPLGPIGD RAATAFAAAL 361 AGASGEAAIA LTGQGEALRF ELAAPSLSSR SGARFASSAD SRIGYLFAAP RPEVIATGRW 421 TFGGGGLPVG AMELDRRADG HMTGLAQIDA YQAGGARLAL DPVRFSSAPG AAMRFSTSAT 481 LSGPLAGGRV ERLRVPIAGA IAATGGMAFN GGCHRVTANK IDVSGLRLVN NGIDLCSTPG 541 APLFSVGSAG VRGAVRLPGL KLRGTSGASP FAFDSGPGEV DLARWRWSLA NADVRIGAGD 601 SMTHFAAGRL SGAAGGQGMA GTLADAQGKI GAVPLGMSEI AGNWRWADGA LTLDGGLVLT 661 DAAADKRFAP LISRDAHLRF ADGVIDARAG FDERESGKKI LDTVIRHRFA DSSGAADLIV 721 KELRFDDNFQ PEQLTTLAQG VVANVQGSVV GDGRIEWNAE GVTSGGTFAT ANTDLAAAFG 781 PVTGLTSTLT FDDLLGLHSA PGQTVALKEV NPGIPVVDGK IDYQLLGGNR VRIEGGRWPF 841 AGGELLLHPA TLDFSATQPR RLMFDVVGVD AAVFLQQFGF ENINATGKFD GTLPVEFDGL 901 GGRVVNGRID ARDGGGTLAY VGELSNHNLG TMANFAFGAL RSLKYDDLTI VLNGNLDGEM 961 VTEIRFGGIG QGIGAKRNFL VDQVAKIPLI FNIRVEGPFR GLIFSAKSFY DPSVLVEQNL 1021 SQLLQAQRDA EAAAAAKAAP VQPPASEPVQ //