LOCUS       AMU95981.1               677 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 NADH:ubiquinone
            oxidoreductase subunit L protein.
ACCESSION   CP013342-3012
PROTEIN_ID  AMU95981.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_15330"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003051616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MIQAIVFLPL LAALVAGLGQ RTIGTTAAKL VTTGALFASC ALSWSIFLSF VAGTGEAGVT
       61 PVLHWVSSGA LQFNWELRVD TLTAVMLVVI TTVSALVHLY SWGYMSEDPD QPRFFAYLSL
      121 FTFAMLMLVT ANNLVQMFFG WEGVGLASYL LIGFWYKKPS ANAAAIKAFV VNRVGDLGFM
      181 LGIFGTFLVF GTVSIPEILA AAPGMAGSTI GFLGHRFDTM TVLCLLLFIG AMGKSAQLGL
      241 HTWLPDAMEG PTPVSALIHA ATMVTAGVFM VCRLSPMFEA APVAAGVVTF VGAATCFFAA
      301 TVGTTQWDIK RVIAYSTCSQ LGYMFFAAGV GAYGAAMFHL FTHAFFKALL FLGAGSVIHA
      361 MHHEQDMRYY GGLRKHIPLT YWAMLMGTLA ITGVGIAGVA GFAGFYSKDG ILEAAFAAGG
      421 GGQIAFWVGI FAALLTSFYS WRLVFLTFYG KPRWEQSEHI QHAVHDDHGH GHDDHAHAPH
      481 QDAHGDGTAG YHPHESPINM LIPLGVLSLG AVFAGMLFNH QFIYPEEGAA FWKGSLAFNE
      541 HLMHAAHEVP LWVKWMPFTV MAIGLFLAWN SYIRNTTLPA RFVAQFSLLH KFLFHKWYFD
      601 ELYNFLFVKP AFAIGRFFWK RGDEGTIDRF GPNGVAALIQ GGTRLAVRLQ SGYVYGYAFV
      661 MLLGLVGLAS WAMVKFQ
//