LOCUS       AMU95976.1               670 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 NADH dehydrogenase
            protein.
ACCESSION   CP013342-3007
PROTEIN_ID  AMU95976.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_15305"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003051597.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPKVTVDGVE IDVPQGATVL QACEMAGKEI PRFCYHERLS IAGNCRMCLV EVSPGPPKPQ
       61 ASCALPTAEG QVIKTDSPMV KKAREGVMEF LLINHPLDCP ICDQGGECDL QDQSVAYGRG
      121 ASRYDENKRA VTEKYMGPIV KTVMTRCIQC TRCVRFAEEV AGVEDIGAIY RGENMQITSY
      181 LERAVASELS GNVVDLCPVG ALTSKPYAFE ARPWELTKTL GIDMMDAVGT NVRIDSRGRQ
      241 VLRVLPRVNE DVNEEWASDK TRHHVDGLMR RRLDRPYVRK DGRLVEASWA EAFAAIKAVN
      301 AGKSVAAIAG DMADCETMFA AKALVNALGS DLLEGRQTGL AYDVTSLSAV NFNTTIAQAE
      361 NADVILLVGT NLRWEAPLIN TRVRKAVWKK GAKVFGIGPE VDLTYKTEWL GDDASLVAKL
      421 PKAAMDALKG AERPMLVFGG GALSVPGVHG AALALAKSVD AVKDGWNGFN VVHFSAARMG
      481 ALMLGYAQPG GIKDIIAAKP KLTFFLGADE VDFAAFDKSF KVYVGHHGDK GAHAADVILP
      541 AAAWTEKDFT TVNTEGRVQR SEKAVFAPGD AREDWSIFRA LADALGVSVG FDSFDECRAA
      601 MIAAVPALGV EGLADYGWSV PKLDAKPEAR AIPSPIKDFY LTNAICRASP TMERCSAELL
      661 HGADYAEAAE
//