LOCUS       AMU95701.1               428 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 type II citrate
            synthase protein.
ACCESSION   CP013342-2732
PROTEIN_ID  AMU95701.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /gene="gltA"
                     /locus_tag="AOA14_13890"
                     /EC_number="2.3.3.1"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003044597.1"
                     /note="type II enzyme; in Escherichia coli this enzyme
                     forms a trimer of dimers which is allosterically inhibited
                     by NADH and competitively inhibited by
                     alpha-ketoglutarate; allosteric inhibition is lost when
                     Cys206 is chemically modified which also affects hexamer
                     formation; forms oxaloacetate and acetyl-CoA and water
                     from citrate and coenzyme A; functions in TCA cycle,
                     glyoxylate cycle and respiration; enzyme from Helicobacter
                     pylori is not inhibited by NADH; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MTDQTAKITL GDKIVESPVL KGTVGPDVVD IRKFYGQTGA FTYDPGFTST ASCESKLTYI
       61 DGDEGVLLHR GYAIGDLAEH STFMEVAYLL LNGELPSGDE LAKFDTTITR HTMLHEQLAT
      121 FYRGFRRDAH PMAIMCGVVG ALSAFYHDST EIHDPHQRMI ASHRLIAKMP TIAAMAYKYS
      181 VGQPFIYPQN DLSYTHNFLR MTFGVPAEEY EVDPAVVRAL DRIFILHADH EQNASTSTVR
      241 LAGSSGANPF ACIAAGIACL WGPAHGGANE AALNMLREIG RPERIPEYIA RAKDKDDPFR
      301 LMGFGHRVYK NYDPRATVMQ KTVREVFTAL KVNDPVFDVA LQLEEMALND DYFVEKKLFP
      361 NVDFYSGVIL SAIGFPTTMF TALFALARTV GWVAQWNEMI SDPAQKIGRP RQLYTGPTQR
      421 AYVPVDKR
//