LOCUS AMU95483.1 623 aa PRT BCT 21-JUN-2016
DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 aminopeptidase
protein.
ACCESSION CP013342-2514
PROTEIN_ID AMU95483.1
SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098
ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098
Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
Sphingomonadaceae; Sphingopyxis.
REFERENCE 1 (bases 1 to 3979087)
AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
111660), a Polyethylene Glycol Degrader
JOURNAL Genome Announc 4 (3) (2016)
PUBMED 27284143
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 3979087)
AUTHORS Yoshiyuki,O.
TITLE Direct Submission
JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Annotation was conducted using PGAP and MiGAP, and PGAP annotation
was curated by referencing to the MiGAP annotation with the aid of
annotation support tool of GenomeMatcher software.
##Genome-Assembly-Data-START##
Assembly Method :: newbler v. 2.8
Genome Coverage :: 110x
Sequencing Technology :: Illumina MiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 11/30/2015 14:33:14
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 3.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 3,797
CDS :: 3,699
Pseudo Genes :: 49
rRNAs :: 1, 1, 1 (5S, 16S, 23S)
complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)
tRNAs :: 45
ncRNAs :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
/mol_type="genomic DNA"
/strain="203-1"
/sub_species="terrae"
/culture_collection="NBRC:15098"
/type_material="type strain of Sphingomonas terrae"
/db_xref="taxon:1219058"
/geo_loc_name="Japan: Kyoto"
/collection_date="1974"
protein /locus_tag="AOA14_12775"
/inference="EXISTENCE: similar to AA
sequence:RefSeq:WP_003047309.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MRMILLAAAL LAGASPLAAQ TATAPAPILT TPEAKDVWTH ADPEVARVTH VSLNLDVDFA
61 TRTLGGTATL DLLVANNAQS IVLDADNLAI SSVTDANGKP LKWAVGDTDP ELGSALTVEL
121 DGAQRIVLTY RSRPGANALQ WLPPEMTAGK TKPYLFSQGQ AILNRSWIPT QDSPGIRQTW
181 DATLTVPGDL VAVMSGEKLS GDKGEALPDG RRRFRFRMDK PVPPYLIAFA VGDLKFRSLG
241 PRSGVWTEAT MLDAAAREFG DVEKMIDAAS ALYGPYRWGR YDMLVLPPSF PYGGMENPML
301 TFLTPTIITG DRSNTDVVAH ELAHSWSGNL VTNATWSDSW LNEGFTTYFE NRIMEALYGK
361 ERAAMYADLD WDNMMRDIDA NGGQTGAKTR LHGAPGDGTL DYTKGSNFLR MIETTVGRAR
421 WDAYLKSYFD RHAFQPQTTA GFLTDLRENL LKGDPALELS LQLDRWSYAA GLPDNAVHHK
481 SATLAAVDAK LAAFNAGGPA RAIAPEGWTT QQWLRFLNGI PRAQSAARLK ELDETLGLSA
541 STNAYVRSAW LELAIANRYE PALPSLRQFA GTVGRGLLIR PLYTGLKRQG AWGDAIARDL
601 FARSRATYHP AVASGIEKIL AGD
//