LOCUS       AMU95470.1              1106 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 carbamoyl
            phosphate synthase large subunit protein.
ACCESSION   CP013342-2501
PROTEIN_ID  AMU95470.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_12710"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_011541290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPKRTDIQSI LVIGAGPIVI GQACEFDYSG TQAIKALKEE GYRIVLVNSN PATIMTDPEL
       61 ADATYVEPIT PEIVAKIIEK ERPDAVLPTM GGQTALNTAL ALFNDGTLTK YGVEMIGADA
      121 EAIDKAEDRI KFRDAMDKIG LESARSGIAH TLDEAFAVLE RTGLPSIIRP SFTMGGTGGG
      181 IAYNREEFEH IVRGGLIASP TTEVLIEESL LGWKEYEMEV VRDRKDNCII ICSIENVDPM
      241 GVHTGDSITV APALTLTDKE YQIMRNASIA VLREIGVETG GSNVQFAVNP KDGRLIVIEM
      301 NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDEILNDIT GVTPASFEPT IDYVVTKIPR
      361 FAFEKFKGAE PLLSTAMKSV GEVMAIGRTI HESMQKALRG LETGLSGFNF VDRLVGASHE
      421 QLKSELAQRT PDRLLIAAQA IREGVSLAEI NRIAGYDMWF LARIAEIVEA ENGVLENGLP
      481 RDAEGLRRLK AMGFSDKRLA YLALQSAHLR PGTGAAAARG SGLIHEAVKA MTGGVTEGEV
      541 RSLRHKLGVR PVFKTIDTCA AEFAAKTPYL YSTYEAPTFG EPENEANPSD RKKIVILGGG
      601 PNRIGQGIEF DYCCCHACFA LGEAGYETIM VNCNPETVST DYDTSDRLYF EPLTAEDVLE
      661 ILHVEQSKGE LVGVIVQFGG QTPLKLAQAL EEAGIPILGT SPDAIDLAED RERFAALVNK
      721 LGLKQPENGI ARSREEAVAV AARIGYPVLT RPSYVLGGRA MEIVDDQAQL ENYIETAVQV
      781 SGDSPVLIDR YLRDAIEVDV DALCDGTDVV VAGVLQHIEE AGVHSGDSAC SIPPYSLPAD
      841 IVAEIERQTD ALARALNVRG LMNVQYAVKD GEVYLIEVNP RASRTVPFVA KAVGSPIAKI
      901 AARVMAGERL ADLPKINRDI DHVAVKEAVF PFARFPGTDP VLSPEMKSTG EVMGIDSDFN
      961 LAFAKAQLGA GDRLPTDGRL FVSVKDSDKP RIVASVKQLA AWGWQVIATG GTADYLAGQG
     1021 IDVERVNKVA EGRPHIVDRI KDGDVQLIFN TTEGWQSLQD SQSIRASALA ADVAYYTTAA
     1081 GSDAATHAIG ALRSHSLEVK PLQDYY
//