LOCUS AMU95409.1 495 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 Fe-S cluster assembly protein SufB protein. ACCESSION CP013342-2440 PROTEIN_ID AMU95409.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_12405" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_011540985.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTDNSETPVK DQAARDAALR VADYEHGWSS AIETDFAPKG LTEDTVRFIS AKKNEPEWML 61 DWRLKAFRHW QTMETPDWAK LNVPPIDYQD AYYYAAPKAK PKLASLDEVD PEILEVYKKL 121 GIPIEEQKVL AGVEGARKVA VDAVFDSVSV ATTFREELKR AGVIFLSISE AIREYPELVK 181 KWLGKVVPMH DNYFATLNCA VFSDGTFVYV PEGVRCPMEL STYFRINAEN TGQFERTLIV 241 ADKGAYVSYL EGCTAPMRDE NQLHAAVVEL VALDDAEIKY STVQNWYPGN AEGLGGIYNF 301 VTKRALCQGK RSKVSWTQVE TGSAITWKYP SCVLNGDDSV GEFYSVAVTN NFQQADTGTK 361 MIHNGKRTRS TIVSKGISAG KSNNTYRGLV RVAPNAEGVR NFTQCDSLLL GDQCGAHTVP 421 YIEVRNPTAT VEHEATTSKI SDDQLFYAMQ RGLGQEEAVA LIVNGFAKEV LQQLPMEFAV 481 EAQKLLGISL EGSVG //