LOCUS AMU95362.1 863 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 aminopeptidase N protein. ACCESSION CP013342-2393 PROTEIN_ID AMU95362.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /gene="pepN" /locus_tag="AOA14_12170" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003049201.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTDASSSPVP PVTIHRSDYR PPEWQVPDIA LDFALGLDTT RVGAALSVVR HADAPAPLTL 61 RGDGLTPLAV CVDGESWNDW HMEGADLIVD LGDRTHAVVE VDTAIDPTAN TRLMGLYASN 121 GMLCTQCEAE GFRRITFHPD RPDVLSRYKV RMTGDKTAFP ILLSNGNCVA KGAGDDGSHW 181 ALWEDPWPKP SYLFALVAGD LVVNRDSFTT MSGRKVELGI WVRAGDEGRT GHAMQALKDS 241 MAWDERVYGR EYDLDLFNIV AVSDFNMGAM ENKGLNIFNT RYILADPDTA TDLDYDGVQG 301 VVAHEYFHNW SGNRVTCRDW FQLSLKEGFT VYRDQSFSAD MGSAPVKRIE DVRLLRAAQY 361 PEDAGPLAHP IRPDSYQEIS NFYTATVYNK GAEIIRMMAT LLGPQRFRAG TDLYFDRHDG 421 EAATCEDFVR AMEEGGAIDL TQFRRWYEQA GTPRLKLTLS EDQGQWALDV VQTVPPTPGQ 481 PEKLPMMMPL RIAAFDRSGG ASLPDTLVTL TGATQRIALG AFDGRPALSV NRGFSAPVIV 541 DFDRAQGELA WLAAHDHDPF ARYEALQQLM LDTLVAAAAG NEVDHRAVVD AVAQTLRGRG 601 EDPAFVAEAV LLPSEAFIGD QMLTVDPDAI RRERLALQAA IGRALEEEWR AILAGKAPPA 661 TDLSPHAKGE RRLRGVALAY LAATGIADIP ALVFGVFSDA DGMTERQAAL ATLAHGDSDE 721 RAHALDIFYQ RYRDNPLVLD KWFQVQAWSM RPDTVEAVRQ LAEHPDFTLS NPNRVRSLYG 781 AFTGNQAAFH QADGAGYRLI ADLVIALDPR NPQTAARMIP PLGRWKRFDE ARAAMMRAEL 841 ERILAQPGLS RDTTEQASKS LLG //