LOCUS       AMU95359.1              1138 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 transporter protein.
ACCESSION   CP013342-2390
PROTEIN_ID  AMU95359.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_12155"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003049193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSFRNISAWC IRNPVPPIVL FALLLLAGIV SFNRMDVNDN PDIEFPAVQV IVAQPGAAPA
       61 ELETQVTQRV EAAVRSVSGV DELSSYVSEG SSRTMVQFAI GTPIDRAYND VNQAISQIRS
      121 NLPDGILEPQ VIRVDIAGGP ITYFSVEATD MTLEQLSWFV DNTVAKELLS VPGMSQVRRS
      181 GGVDREIRVI LDPARMQSYG LTASQVNQQL RQVNLNAAGG RTEIAGSEQA VRVLGNAQNA
      241 FQLGETRISI GNGRTIQLSD VAKVTDGYAE QRNLAKINGR QVLSFSIEKA KGSSDVSVHD
      301 EAMKKLAEIE KNNPKVKFKI LFTRTEYTKE QYRSSMAAMI EGAVLAVVVV FLFLRDWRAT
      361 MISAMAIPLS AIPTFWFMDL MGFSLNSLSL LALSLVAGVL VDDAIVEIEN IVRHMRMGKT
      421 AYQASIDAAD EIGLAVVATT MSIVAVFLPV ALMPGISGQF FIQFGMTVVF AVLMSLAVAR
      481 MITPMIAAYF LAAHGEQAHA EGPWIDRYER VLRWTLDNGK HHAVRARYEA VPTRLAFLAV
      541 PLILSGIFVL YSAYAYFQPV PVGQDAPNTA LYFLLRTPAL TVIVFLATSL LAILLGALAW
      601 FVGMRQWAFT GWAKFMLQRA WARLFDHRVW IVGIGAAAFV LSIVLFATLP QQFQPTINSD
      661 YSQIKYELPP GSTLAQSEHI ANQVSSILSA SPAVDTAFFD VNVGGGNAFL TLKKDRDISS
      721 VEWERSLQPK LTAIPDARVS FQSQSGGFSG RDITMVIGGD DPVALEKHAL KIVDEMSKLK
      781 ELRAPRIEGD IPRPEIIVNP RMDLAAELGV TTAALSQTIR IATLGDIDQN AAKFSLSDRQ
      841 IPIRVLLSED SRRSLATIEN LPVPTSRGTT VPLKSVAEIG FGAGPTELRR YNQTRRIVIG
      901 ADLAPGLVTG NAQQKIDALP AVKNMPQGIR KVIQGDQKWQ AELIKNFLIA VVSGLMLVFS
      961 TLVLLYRRFL SPLVNMSSLL LAPLGGLLGL LVTGMPISMP VYIGLLMLLG IVAKNSILLV
     1021 DFAIEEMDKG IGKVEALVDA GRKRAQPIIM TTVAMVAGMV PTALSLSGDG AWRAPMGVVV
     1081 IGGLILSTML TLLIVPAGFS LADSIEKRLG RFFSSNLLTY KKGDDTRPHG DAAPQPAE
//